Cucurbita moschata (crookneck pumpkin): 111434645
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Entry
111434645 CDS
T05248
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
111434645
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmos01007
]
111434645
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111434645
Enzymes [BR:
cmos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
111434645
Amino acid related enzymes [BR:
cmos01007
]
Aminoacyl-tRNA synthetase
Class II (U)
111434645
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
111434645
Prokaryotic type
111434645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
111434645
NCBI-ProteinID:
XP_022927879
UniProt:
A0A6J1EJ88
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPTVSVGRDRLFAALGRTYSQEEFEELCFRFGIELDDVTTEKAIIRKEKHLEEEADEDEE
VIYKIEVPANRYDLLCLEGLAQALRIFNKQEATPSYKLTNITKESMHKMHVKPETSSIRP
YVVCAVLRDITFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALPPT
AINFVPLKQTKSFRADELMEFYKSDLKLKKFLHIIEKSPVFPVLFDRNRTVLSLPPIING
AHSAITLKTKHVFIECTATDLTKANIVLNTMVTIFSALCKKKFEIEPVEVVYSDGKSSIY
PELSLYNMEVSLSYITNCIGVSLEAEEVTSLLNRMQLHAKQSMSGDKSSITISVPPTRSD
VLHACDVMEDVAIAYGFNNIPKSKPASLQPLPLNEFSDLIRAEIAMTGFTEVLTWILCSY
KENFSMLKREDDKSTAVIIGNPRSTDFEVVRTSLMPGLLKTVGHNKDHPKPIKIFEVGDV
SLLDNAKDVGARNHRHLAALYCSANSGFELIHGLVDRIMEVIGAPFVSVGVETGYYIKCS
DNPEFLTGRQAHIIYNGKKIGTFGIVHPEVLNNFDIPDPCSFVELSIESFL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtaagcgtcggaagagatcgtttatttgctgccctcggaagaacttattcg
caggaagagttcgaagagctgtgctttaggtttggaattgagcttgatgatgttacgaca
gagaaggcgattattaggaaagagaagcatttggaagaagaagctgatgaagatgaagaa
gtcatctacaagattgaagtccccgcaaacagatacgatttgctctgtcttgaagggctt
gctcaagcactgcgcatttttaataagcaggaggcgacacccagctataaattaaccaat
atcaccaaggaatctatgcacaaaatgcatgtaaaacctgagacttcctcgattcgtcct
tacgtggtttgtgctgttttgagagacataacttttgatgaagcaagttataatagtttt
attgatctgcaagacaaacttcatcagaacatatgtcgacggagaaccctcgttgccatt
ggaactcatgatctggatacacttgaaggccctttcacctatgaggctttgccaccaaca
gctataaactttgtgccactgaaacagacgaagagtttcagagctgatgagctgatggag
ttctataaatcagatttgaagctgaagaagttcttgcacataatagaaaaatcacctgta
tttcccgttttgtttgatcgcaacagaactgttttgtctttaccaccaattatcaatggt
gcacattcggctattactttgaagacaaagcatgtgtttattgaatgcactgcaactgat
ctgacaaaggcaaatattgtattgaatactatggtgactatattttcagcgctgtgcaaa
aagaagttcgaaatcgagccagttgaagtggtatattctgatgggaagtcaagtatttat
ccagagctatctctctacaatatggaagtttctctgtcttatatcactaattgcattgga
gtctcattggaggcagaagaggttaccagtttgttaaataggatgcaattacacgctaag
cagtcaatgtcaggtgacaagtctagtataactatatcagtgcccccaacaaggagtgat
gtgcttcacgcatgtgatgtcatggaggatgttgctattgcttatgggttcaataacatc
ccaaaaagtaaacctgcatctttgcagcctctaccactaaatgagttcagtgaccttatc
agagcagagattgcaatgactgggttcacggaggtacttacatggatcctatgttcttat
aaagagaacttttccatgttaaagcgtgaagatgataaatctaccgctgttatcatcgga
aatccccgttcaactgattttgaggttgtacgaaccagtcttatgcctggtcttttgaaa
actgttggacataataaagatcatccaaagcccataaagatatttgaagtaggtgatgta
tcattactggataatgcaaaagatgttggcgcaagaaatcatcgtcatcttgctgctcta
tattgcagtgccaattctgggtttgagttgatccatggtttggtcgacagaattatggaa
gtcataggggctccttttgtttcagttggcgttgaaactgggtattacataaaatgttca
gataatccagagtttcttactggtagacaagctcacatcatttataatggaaagaaaatt
ggcactttcggcattgttcatcccgaggttttgaataactttgacattcctgatccatgt
tcctttgtcgaacttagcatcgagagctttctatag
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