Cucurbita moschata (crookneck pumpkin): 111434652
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Entry
111434652 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111434652
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111434652
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ZirS_C
Beta_helix
ET
Motif
Other DBs
NCBI-GeneID:
111434652
NCBI-ProteinID:
XP_022927888
UniProt:
A0A6J1EMB1
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MSILRGFLLLFFPFMFLYSSSAIAFSNNVVSLGAKPDGKSDSTKAFETAWANACGSTRPT
SIYVPPGRYYLRSVTFNGPCKNNAIFIRIDGTLVAPSDYRVIGNSAAWILFRGVDGVTIS
GGVFDGKGSGLWACKNSTKTCPSGATTIEISHSKNVVLSALTSLNSQMFHIVVNGCQNIK
IKGLKVLALGNSPNTDGIHVQLSSDVIILNSKIGTGDDCISIGPGTSNLWIENIVCGPGH
GISIGSLAKDLEEAGVQNVTVKKTLFSRTQNGVRIKAWGRPSNGFVKNILFQHIVMDNVQ
NPIVIDQNYCPNHKGCPGQASGVKISDVTYQDIHGTSATQIAVKFDCSPTNPCSGIKMED
VNLSYKDQIAGATCSHAGGTATGRVEPGSCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcttagaggctttcttcttcttttctttccttttatgttcctctattcttcc
tctgccattgccttctcaaataatgttgtgagtttaggagccaagcccgatggcaaatct
gactcaacgaaagcatttgaaaccgcatgggctaatgcatgtggctccacgagaccaacc
tctatttatgttccaccaggaagatattaccttcgtagtgtaacgttcaatgggccgtgc
aagaataatgcaattttcatacgcattgatggcactttggtggctccatcagactatagg
gttattggcaattccgcggcttggatcttgtttagaggagttgatggagtaactatctca
ggtggagtttttgatggtaaaggaagtgggttatgggcatgcaagaactcgaccaagact
tgtcctagtggggccacgaccattgaaatctcccactcgaagaatgtggtgcttagtgca
ttaacatcactcaatagtcaaatgtttcatatagtcgtaaatggttgccaaaatatcaaa
ataaaaggacttaaggtcttggctctgggcaacagtcccaatactgatggcattcacgta
caactatcatctgatgtgatcatactcaactccaagataggcacgggagatgactgcata
tccatcggccctggaacatccaacttgtggattgagaatattgtttgtggacctggtcat
ggaataagcattggaagtctagcaaaagacttagaagaggctggagtgcagaacgtgacc
gttaaaaaaactttattttcacgcacccaaaacggggtgagaatcaaggcatggggtagg
ccaagcaatgggtttgttaagaatatcctcttccagcatattgttatggacaacgttcaa
aatccaattgttattgaccaaaattattgcccaaatcacaaaggttgtccgggtcaggct
tcgggcgtcaaaatcagtgacgtgacgtaccaagacattcatggaacatcagccactcaa
attgcagtgaaattcgattgtagtccaacaaacccatgcagtggaataaaaatggaggac
gtaaacctttcttataaggatcaaatagccggagcaacatgtagccatgcaggaggaact
gctactggtcgtgtcgaaccgggtagttgcttgtag
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