Cucurbita moschata (crookneck pumpkin): 111434691
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Entry
111434691 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111434691
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111434691
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
V-set_2
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111434691
NCBI-ProteinID:
XP_022927938
UniProt:
A0A6J1EMF9
LinkDB
All DBs
Position
Unknown
AA seq
390 aa
AA seq
DB search
MAYTIKTLLLIISSIYFFLQLSSAATYNVITYGAKPNGKTDSTRPFLKAWTSACSSSTPS
TINVPKGRFLLKPITFRGPCNNKITFRLNGTLVAPLDYRALGSSGYWILFIKVNDVSFFG
GNIDAKGASYWACRDSGKDCPPGARSITFNWANNIILSGLTSLNSRQSHITINSCNNVLV
KNVKIMAPDQSPNTDGIHVQSSTDVTITGTTIQTGDDCISIGDGTKNLFMTHIKCGPGHG
VSIGSLGKEFDEQGVQNVTLMNAVFTKSDNGVRIKTWARPGNGFVKHVVFQNIVMNNVKN
PIIIDQNYCPDNEGCPGQSAGVKISDVAYKNIGGTSATSEAITFDCSPTNPCGDIRLEDI
KLTYNNKATTSTCNNVGGSSMGVLMPQSCL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcctacacaatcaaaacattactcctcatcatctcctccatctatttcttccttcaa
ctctcgagtgcagccacttacaatgtgattacttatggagcaaaacccaacggtaaaacc
gactcgactcgaccctttctcaaggcatggacatcggcctgcagctcctccacgccgtcc
accatcaatgtccctaagggaagattcttgctcaaacccatcacattcagagggccatgt
aacaacaagattacattccgtttgaatggaacccttgtggcacctctagactaccgtgcc
cttggaagttctgggtattggattttgttcattaaagttaacgatgtttctttcttcggc
ggcaacattgacgcaaagggcgcttcgtattgggcctgcagggactctggaaaggattgt
ccaccgggagctaggtcaataacattcaattgggcgaacaacatcatattaagtgggctg
acatcactcaatagccggcagtctcatattacaattaacagttgcaataatgtattggtt
aagaatgtgaagataatggctcccgaccaaagccccaatactgacggcattcatgtgcag
tcatcaaccgatgtaaccatcacaggaactaccatccaaactggtgatgattgcatatcc
attggagatggaactaagaatttgtttatgactcatatcaaatgtgggcctggccatggc
gtaagcattgggagcttgggaaaagagtttgacgaacaaggcgtccaaaatgtaacattg
atgaatgcagtgttcactaaatccgataatggtgtgaggataaagacgtgggcaaggcct
ggcaatggcttcgtgaaacatgttgtgtttcagaacatcgttatgaacaatgttaagaat
cccatcataatcgatcaaaattattgtccggacaatgaaggttgtcctggtcagagtgct
ggagtgaagattagcgatgtggcgtataaaaacattggaggaacatcagcaacatcagag
gctataacatttgattgcagccctaccaatccatgtggtgacatacgtttggaggacatc
aagcttacgtataacaacaaggcaacgacatcgacatgcaacaacgttggtggatcaagt
atgggagtacttatgccacaaagttgcttgtga
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