Cucurbita moschata (crookneck pumpkin): 111435201
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Entry
111435201 CDS
T05248
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
cmos03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111435201
03083 Polycomb repressive complex
111435201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111435201
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111435201
Histone modification proteins
HAT complexes
HATB complex
111435201
HDAC complexes
Sin3A-HDAC complex
111435201
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111435201
PRC2.2
111435201
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111435201
Heterochromatin formation proteins
Other heterochromatin formation proteins
111435201
Chromatin remodeling factors
NuRD complex
111435201
NuRF complex
111435201
NuRF complex (fruit fly)
111435201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
AftA_N
Motif
Other DBs
NCBI-GeneID:
111435201
NCBI-ProteinID:
XP_022928345
UniProt:
A0A6J1ERG6
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAGEQNGGVDEVMEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVPLAPFPHPANSSLAV
HKLVLGTHTSEEVPNFLMVADVILPVKASETRIDITGENPIMPEVEITQKIRVDGEVNRA
RCMPQNPEIIGAKTSGCEVYVFNCAKQGAKAQGGECDPDSRLRGHDKEGYGLSWSPFKEG
YLLSGSNDQKICLWDVSSMADKNVLDAMNVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRKLAEPLHVLSS
HTEGVYEVEWDPNHETVLASSGDDRRLMVWDLNNMGNEQDGDAEDGPPELLFSHGGHKAK
ISDFTWNAHQPWVIASVAEDNSVQVWQMAKGIYR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaacagaacggcggtgtcgatgaggtgatggaggaattcgccatctggaag
aagaattctccctatctgtacgatcttctcatttcccactctcttgagtggccgtctctc
actgttgattgggtgccattggcaccatttcctcacccagccaattcttctctcgctgtc
cacaagctcgttcttggaactcacacttcggaggaagtccccaactttctcatggtggcc
gatgtaattttacctgtcaaagcatccgaaactagaatcgacattactggggaaaacccc
atcatgccggaggtagagataacccagaagatacgtgttgatggagaggtgaacagagcg
cgatgcatgccgcagaacccagaaattattggggcaaaaacgagtggctgtgaggtgtat
gtttttaattgtgctaaacagggggcgaaggctcagggaggtgagtgcgatcctgattcg
agattgaggggtcatgataaagagggttatgggttgtcttggagcccttttaaggagggt
tacctcttaagtggctcaaatgatcagaaaatctgtttgtgggacgtgtcttccatggct
gacaagaacgttcttgatgcaatgaacgtctatgaggctcatgaaagtgtggtcggtgat
gtgtcatggcatttgaagaatgagaacttgtttggatctgtaggcgatgattgcttgttg
gtgatatgggatttgcgcacaaataaatctgtggattctgttcgagctcacgaggaggag
gtgaactatgtttctttcaatccatataacgaatggattttagcaacagcatcatcagat
accaccgtgggtctatttgatctacgaaagcttgccgaaccactccatgttcttagcagc
cacacggagggagtgtatgaggtggagtgggatccaaatcatgaaactgtattagcatct
tctggtgatgatagaaggttgatggtatgggatctcaacaacatgggaaacgagcaagat
ggggatgctgaagatgggcctccagagctgctgttttcacacggaggccacaaggctaaa
atctctgacttcacctggaacgcccaccagccttgggttatagcaagcgtcgctgaagac
aactctgttcaggtctggcaaatggccaaaggtatttatcgatga
DBGET
integrated database retrieval system
