Cucurbita moschata (crookneck pumpkin): 111435228
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Entry
111435228 CDS
T05248
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like isoform X1
KO
K04523
ubiquilin
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111435228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111435228
03051 Proteasome [BR:
cmos03051
]
111435228
Membrane trafficking [BR:
cmos04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111435228
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111435228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
UBA_NBR1_C
XPC-binding
Dsc3_N
UBA_HOIP
Rad60-SLD_2
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
111435228
NCBI-ProteinID:
XP_022928404
UniProt:
A0A6J1EKR3
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MGADGDSSEHRVEGGGDGEEGGVGVSINIRCSNGSKFSVTTSLDSTVGTFKSILAQNCDI
PADQQRLIYKGRILKDDQTLVSYGLQADHTIHLVRGFPQGSSAPSAPASNDNSRSSETAT
APGVTRGVGSTGSDAFGNAGLGASLFPGLGFNSLGGGGAGLPEFEQVQQQLTQNPNMMRE
IMNMPAIQNLMNNPDMMRSLIMSNPQMRDIIDRNPELAHILNDPGILRQTLEAARNPELM
REMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMTGNAGNDSSSNPFAALLAN
QGGAQARNESNNSSTTGSETTENAAPNTNPLPNPWGGTQTTTTQPTPVGDARPGVGGLGG
AGRTNVERSVGGTPDVAQLNQFLQNPAISQMMQSLLSNPQYMNQILNLNPQTRGMVDMNP
QLREMMQNPEFIRQLTNPEMIQQMLSIQQSLFSTLNRQPSSQDSAQSDTAAGVPNTAGLE
MLMSLFGGLGAGGLATPNNPNVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAA
VERLLGNLGQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgacggtgattccagcgagcaccgggttgagggcggtggcgatggtgaagaa
ggtggagttggtgtttctatcaatattcgttgctctaatggttcgaaattttcggtgacg
acgagtcttgattccacggttgggacatttaaatcaattcttgctcagaattgtgatatt
ccagctgatcaacagcgattgatctacaagggtcgcatcttgaaggacgatcaaacctta
gtcagttatgggttacaggcagatcatactattcacctggttcgtgggtttccccaaggt
tcgtcagcaccgtctgcacctgcttctaatgataatagtagaagttctgagactgctact
gctcccggtgttacaagaggtgttggttccactgggagtgatgcttttggaaatgctggc
cttggtgcatctctgtttcctggattaggtttcaattctctcggtgggggtggagctgga
cttcccgagtttgaacaagtgcaacagcagttgactcagaatccaaacatgatgagggaa
ataatgaacatgcctgcaatccagaacttgatgaataaccctgacatgatgcggagctta
attatgagcaatcctcagatgagggatattattgacaggaaccccgagcttgcgcatata
ctcaatgaccctggtattcttcggcagacattagaggctgcaaggaatccagaactcatg
agagagatgatgagaaacactgacagagcgatgagtaacatcgaatcttctcctgaggga
tttaacatgctgagacgcatgtatgagaatgttcaggagccatttctgaatgcaacaacg
atgactggaaatgctgggaatgattcgagttcaaacccatttgcagctctcctggcaaac
caagggggtgcacaagctaggaacgagtctaataattcttctactacaggatcggaaaca
accgaaaatgctgctccgaatacgaatccgcttcctaatccctggggaggaactcagaca
acaaccacacagcctactccagtaggtgatgcaaggcctggtgttgggggtttaggaggg
gctggtcgcacaaatgtggaacgttctgttggtggcacgccggatgtagctcagttgaat
cagtttctgcagaacccggctatttcacagatgatgcagagcctgctctccaatcctcag
tatatgaatcaaatcctcaatctcaacccacagacgcggggtatggttgatatgaatcct
caattaagagaaatgatgcaaaatcccgagttcattcgccaattaactaatcctgagatg
atacagcaaatgctatcaattcagcagtcacttttctcgaccttaaatcgacagccatca
tctcaagattctgctcaatcggacactgctgcaggtgttcctaacaccgctggattggag
atgttgatgagcctgttcggtgggcttggcgccggtgggttggctactccgaacaatccg
aacgtgcccccagaagaactatatgcaactcaactttcacagctccaagagatgggtttt
ttcgacacccaagagaacatcagagctctacgcgctacgtccgggaacgttcatgctgct
gtcgagcgactgctgggaaatctcgggcagtaa
DBGET
integrated database retrieval system
