Cucurbita moschata (crookneck pumpkin): 111435256
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Entry
111435256 CDS
T05248
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111435256
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111435256
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111435256
03036 Chromosome and associated proteins [BR:
cmos03036
]
111435256
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111435256
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111435256
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111435256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
NUC
CDGP
Motif
Other DBs
NCBI-GeneID:
111435256
NCBI-ProteinID:
XP_022928450
UniProt:
A0A6J1ERP7
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MTVDNILSHASLEWKFSQVFGERVAGEDIQDVDIISAIGFDKSGDNLAIGDRGGRVIIFE
RNDRKDTSKNIHTRNKLEQLNLTPASHPEYQYKTEFQSHEPEFDYLKSLEIEEKINKVKW
CVSPNGSRFILSTNDKTIKLWKVKEHKAKTIKEMNHDQYVSSENALLAEMSFSSEQGKFS
LSSGCHRDLSENTAMNKVASKDINDMIPDLDDTSWRRCRKVYGHAHDFNINSISNNSDGE
TFISADDLRINLWNLEISNQCFNIIDMKPSNMEDLTEIITSAEFHPLHCNLLAYSSSRGF
IRLVDMRQSALCDHSAILLRAEELSRPKSFFTEIISSISDIKFSSDGRFIISRDYMNLKL
WDIHKGSSPVAVFKVHEHLRPRLCELYDNDSIFDRFECCLSADGLHFATGSYSNQLRMFS
YGYGSAEGITTEAGKTPDRKPNLQTARRARRRSSLSNLTRDFFRHGNEHSSSGSNEASVD
LNSKLLHLAWHPTENLIACATGSGLFMYYA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagacaatatcttgtcccacgcttctcttgaatggaagttctctcaggtcttc
ggcgaacgagttgccggagaggatattcaggatgttgatatcatatctgcaattggattc
gataagagtggtgataaccttgccattggcgatcgaggtggtcgtgttattatatttgaa
agaaacgacaggaaggatacttcgaaaaatatccatactcggaataagttggagcagttg
aatcttactcctgcatctcatcctgaataccaatacaagactgaatttcagagtcatgag
cctgagtttgattacttgaagagtttggaaattgaagagaagattaataaagtaaagtgg
tgcgtatcacccaatggatctcgcttcatcctttcaacaaatgacaaaactattaaacta
tggaaggttaaggagcacaaggcgaaaaccattaaagagatgaaccatgatcaatatgtg
agttcagaaaatgcacttttggcagagatgagtttctctagcgaacaaggaaaattctct
ctttccagtggctgccatcgggatctttcagagaatacggcgatgaataaggtagcgtct
aaagacattaatgacatgattcctgatctagacgatacttcttggagaagatgccgaaag
gtgtatggtcatgctcatgattttaatattaactccatttctaacaatagtgatggcgag
acgtttatttctgctgatgacttgcgaataaacttatggaacctcgagattagtaatcag
tgtttcaatatcattgacatgaagccttcaaacatggaagatcttacggagatcataacg
tcggctgaattccatcctctgcactgtaatcttcttgcgtacagtagctcaaggggcttt
attcgtttagtggatatgcgccagtctgcattatgtgatcatagtgcaattctattacga
gccgaagaattgagtcgaccaaaatcattttttacggagatcatttcttccatttcggat
ataaaattttcaagtgatgggcggttcatcattagtcgggattacatgaatttaaagctt
tgggatatccataagggttcttctccagtcgcagttttcaaggttcatgagcacctgcga
cctaggttgtgtgagctgtatgataacgattccatatttgatagatttgaatgttgccta
agtgcagacggacttcactttgcaactggatcttatagcaaccaattacggatgttctct
tatggctatggaagtgcggaagggatcactactgaagcggggaaaactcccgataggaag
ccaaatctccaaaccgctaggcgggctagacgacgatcatccttaagcaatttgacacgt
gatttttttcggcacggcaatgaacattcaagctcgggaagtaatgaagcttctgttgac
ctgaactccaagttactacatttggcgtggcatccaacagaaaatttaatcgcctgtgct
actggaagtggcctgttcatgtattatgcataa
DBGET
integrated database retrieval system
