Cucurbita moschata (crookneck pumpkin): 111435488
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Entry
111435488 CDS
T05248
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111435488
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111435488
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111435488
NCBI-ProteinID:
XP_022928644
UniProt:
A0A6J1ELF8
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All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MMAGCWFKVLMVLLLSMAVLMPTIRAGIAEYDDFLLKKAVAAEQVAQEAYNPDPMNVTNH
LNLQVHLAFEGSNSTRRGLAKYKGPCLATNPIDRCWRCNKKWAKNRKKLASCVLGFGRKT
TGGKRGRYYKVTDPSDTEFVDPKPGTLRHACIQKRPLWITFGRSMIIKLSKELLISSHKT
IDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHIVAANGGMIRDAYNHVGLRTVSDGDGI
SIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITVSNSHFTHHNDVMLFGASDSYQGDSIM
QVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPN
PAARQITNRNYAPESVWKTWTWRSEGDLLMNGAYFVQSGSPSKRRPYSRLDMIKAKPGTY
VRRLTRFAGSLNCYEGRPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgatggctggctgctggtttaaggttttgatggttctgctgctttcaatggctgttctt
atgccaactatccgagctggcattgctgaatatgatgactttttgctcaagaaggctgtt
gcagccgaacaagtggctcaggaggcctacaaccccgaccccatgaatgtcactaaccat
ctcaaccttcaagttcatttagcttttgagggaagcaatagcacaaggaggggcttagcc
aaatacaagggaccatgtttggcgacaaacccgatcgaccgatgttggagatgcaacaaa
aaatgggccaaaaaccgcaagaagctagcctcttgtgtccttggttttggccgaaaaacc
accggtggcaaaagaggccgttactacaaagtaaccgacccatcagacaccgaattcgta
gaccctaaacccggaaccctaagacacgcatgcattcaaaaacgaccattatggatcaca
tttggccgtagcatgattatcaagctatcaaaagagctattaatatcaagtcacaagacc
atcgatgcacgaggtgccaatgtccatatagcctatggtgctggtctaagcattcaattc
tcccgcaatgtaatcatccacggcctacacatccaccacatcgtggcagccaatggtggc
atgatccgtgacgcatacaaccatgtgggcctacgaaccgtcagcgatggcgatggcata
tcaatctttgggtcatccaacatttggctggaccatctctccatgtcaaactgccaagat
gggctcatagacgcaatccaaggctccacagctatcacagtctcaaactcccatttcacg
catcataacgacgtgatgctgtttggtgcaagtgattcatatcaaggggactccatcatg
caagtgaccgtggcatttaaccattttggtaaagggttggtgcagcgaatgccaaggtgc
cgatgggggttcttccatgtggttaataatgactatactcattggttgatgtatgcaatt
ggtgggagccaacatccaacgattataagccaagggaataggttcatagcgccgccaaac
ccggctgctaggcagataaccaacaggaactatgcgccggagagtgtatggaagacgtgg
acgtggaggtcggaaggggacttgttgatgaatggggcttattttgttcagtcggggagt
ccgagtaagcgaaggccgtacagcaggttggacatgatcaaggctaagcctgggacttat
gttagaaggcttacgcgctttgcggggtcgctgaattgctatgaggggcgcccatgctaa
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