Cucurbita moschata (crookneck pumpkin): 111435508
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Entry
111435508 CDS
T05248
Name
(RefSeq) DNA helicase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111435508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111435508
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111435508
INO80 complex (yeast)
111435508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
PSY3
Motif
Other DBs
NCBI-GeneID:
111435508
NCBI-ProteinID:
XP_022928659
UniProt:
A0A6J1ELH4
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MDRNRQSKDLFYSNLFNLEPLLNFQLPQPEDGFDYYANSSQDESRGSPGRTIAKHGNGTM
TKRELSLARKRRQSLNSEEDNDSVDDYYGTHVTEERYRQMLGEHIKKYKRRSKDSSSPMP
TRIGNSVPKGNSSSRARRSGSEQQGGFLEVETANDCLNDYNPHRPGSHHEAGLARLRTTD
RVIYEPAYLDIGDGITYKIPPTYDKLAASLNLPSFSDIQVEEVYLEGTLDLGSLASMIAD
DKRFGTRSQTGMGDPQPQYESLQARLDALAFSNSPQKFSLKVSDVGLNSSIPEGAAGSIK
RAILSDGGVLQIYYVKVLEKGDTYEIIERSLPKKQKVIKDPSVIEREEMEKIGKIWINIV
RRDLPKHHRNFTAFHRKQLIDAKRFSETCQREVKMKVSRSLKMMRGAAIRTRKLARDMLL
FWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNL
HPSESLPLGDEKPNFEEGTWNSDSVPAEEEDPEEAELKMEALRVAQDAVSKQKRLTSAFD
DECSRLRQASEPDQNEVAGASNIDLLHPSTMPVTSTVQTPELFKGSLKEYQLKGLQWLVN
CYEQGLNGILADEMGLGKTIQAMAFLAHLAEDKNIWGPFLVVAPASVLNNWVDEINRFCP
DLKALPYWGGLAERTVLRKKINPKNLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVL
DEAQAIKSSTSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNE
WFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTRKTEITVHCKLSSRQ
QAFYQAIKNKISLAELFDSNRHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYLYFA
DIPNPLLPPPFGEHEDVHYSGGHNLIEFKLPKLVHQEVLRCSKSFAVAHGIDGGYLSKHF
NIFSSENVYQSIFMQGDNLHHSYRRSGTFGFTHLMDLSPAEVTFLANGSFLERLLFSIMR
WDRQFLDGILDFIMESIDDDPENGSLEQGKVRAVTRMLLMPSTSQTNLLRRKLATGPGDT
PFEALVIPQQERLQANAGLLHSAYTFIPRTRAPPIGAHCSDRSFAYQTVEQLHDPWVKRL
FIGFARTSDFSGPRKPNGPHPLIQEIDSEIQVSQPALQLTYSIFGSCPPMQSFDPAKLLT
DSGKLQTLDILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRD
MVRDFQLRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKD
VTVYRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDILAPEDVVSLLLDDSQLEQKL
IEIPIVAKDRQKKKQAKGIRVDAEGDASLEDLMNLESGGTEYDRSPDLEKTKSSSKKRKG
GSEKQNSSKARSLQKINETSPVVDFDLDDYQQNLEPQTQKPKRPKRPTKSVNENLVPATT
STNMGISDHTQYPQ
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtaacaggcaatccaaggatttgttctactccaacctcttcaatctcgagccg
ctgctgaactttcaacttccgcaaccggaggatggttttgattattatgcgaatagtagt
caggatgaaagcagaggtagtccaggtagaacaattgcaaaacacggtaatggtaccatg
actaagagagagttgagcttggcaaggaaaagaaggcagtccctgaacagtgaggaggac
aacgacagtgtggacgattactacgggacgcacgttactgaagagcggtatcgacaaatg
cttggagaacacattaagaagtataagcgaaggtctaaagactcctcatctcccatgccc
acacgcattgggaattcagtgcccaagggcaactcaagttcaagagctaggaggtcgggg
agtgagcaacaaggaggatttcttgaagtggaaactgcaaatgactgccttaatgattat
aatcctcatagaccaggaagtcatcatgaggcaggtcttgctcggctgcgtaccactgac
agagtaatatatgagcctgcatatttggatattggggacggcatcacttacaaaattccc
ccaacttatgataagctggctgcttcactgaacttgccaagcttctctgacatccaagta
gaggaagtttacttagagggtacattggatttgggatccttagcatcgatgattgctgat
gacaaaagatttggaacccgaagccagacggggatgggggaccctcagccccagtacgag
tcgcttcaggcaagattagatgccttggcattttcaaactcgccacagaaattcagtctc
aaagtatctgacgttgggctgaattcatccatccccgagggggctgctggaagtattaag
cgagctattttatctgatggtggtgtgctacagatatattatgttaaggttttggagaag
ggagacacttacgagattattgaacgaagcctgcccaagaaacaaaaagtaatcaaagac
ccttctgtcatagagagagaggaaatggagaagattgggaaaatctggatcaacattgtt
aggagagacttgccaaaacatcatcgtaacttcacagcctttcatcggaagcagctaatt
gatgccaagaggttctcagaaacttgccaaagggaggtgaaaatgaaggtcagcagatct
cttaaaatgatgaggggtgctgctattcgaacaaggaaattagctagagacatgttgctc
ttttggaagcgaattgataaggagatggcggaagtgcggaaaagagaggaaagagaggct
gctgaagctttgaggcgagagcaggaacttcgagaagctaagagacagcagcagaggctc
aattttcttatacaacaaacagaactttatagtcattttatgcagaacaaatcaaatttg
catccttctgaatctctccctttgggagatgaaaaaccaaattttgaagaagggacttgg
aattcagatagcgtgcctgctgaggaagaagatcccgaggaggctgaactgaagatggag
gcacttagagttgctcaagatgcagtttcgaagcaaaaaaggttaacaagtgcatttgat
gatgaatgctcaaggttacgccaggcttctgaacctgatcaaaatgaggttgctggagct
agtaacatagatctgcttcatccctcaaccatgcctgtaacttcaacagttcaaacacct
gagttgtttaaaggtagccttaaagaatatcagctaaaaggtctccaatggttggtcaat
tgttatgaacagggtttaaatggcatacttgctgatgaaatgggccttggaaagacgata
caggctatggcttttttggctcatttggctgaggataaaaatatatgggggccttttctg
gttgttgcacctgcatctgtcttgaacaattgggtcgatgaaatcaaccgtttctgcccc
gacctaaaagctcttccatattggggtgggcttgcggagcgtacagttctcaggaaaaag
attaatcccaagaatctatatcgcagggatgctggttttcacatcctcattaccagctat
cagctacttgtttctgatgaaaagtattttcggcgtgttaagtggcaatatatggttttg
gatgaggcacaggcaatcaagagttctacaagcataaggtggaagacactgctaagcttc
aattgtcggaatcgattgctgcttactgggactcctgtccagaataatatggccgagttg
tgggcccttctacatttcatcatgcctactttatttgatagccacgaacaattcaatgaa
tggttttcaaaaggaattgaaaatcatgcagaacatgggggtactttgaacgagcaccag
cttaaccgcttgcattcaatattaaagccttttatgttgcggagagtaaaaaaggatgta
gtctctgagcttactagaaaaacagagattacagtgcattgcaagttaagttctcggcag
caagctttttatcaagctatcaagaataagatatctctagctgagttgtttgatagcaat
aggcatcttaatgagaaaaaaattctcaatcttatgaacattgtcattcagctgagaaag
gtgtgcaatcacccagaattgttcgaaaggaatgagggaagcacatacctgtactttgca
gacattcctaatcctcttttgccccctccttttggcgaacatgaggacgttcactactca
ggaggtcacaatctcatcgagtttaagttaccaaaactagtccaccaagaggttcttcga
tgttcaaaatcatttgcagttgcgcatggcattgatggaggatatctttcgaaacatttc
aacatattttcttcggaaaatgtttatcaatccatattcatgcaaggagacaacttacat
cattcttatcgtcgaagtggtacttttggtttcacccatttgatggacctgtctcctgcc
gaagttacatttttggccaatggttcttttctagaacggctacttttttccataatgaga
tgggaccgacaatttctggatggaatcttagacttcattatggaatctattgatgatgat
ccagaaaatggttctcttgagcagggaaaagtgcgtgctgttacaagaatgttgttaatg
ccttccacatcacagactaacttactcaggagaaaacttgcaacagggcccggtgatact
ccttttgaggctttagtcattcctcaacaggagagacttcaggcaaatgcagggcttctt
cactcagcatacacgtttattccaagaactagagctccaccgataggtgcgcactgttca
gatcgaagcttcgcttaccaaacggttgaacaattgcatgacccttgggtgaagagatta
tttattgggtttgcacgcacatctgactttagtggacccagaaaaccaaatggaccccac
cctttgattcaagagatagattctgaaatacaagtttcccagcctgctcttcagttgaca
tacagtatttttgggtcttgtcctccaatgcaaagttttgatccagcaaagttgctcacg
gactccgggaagctacaaacactagatatattactgaaacgcttacgggctgaaaatcat
cgtgtacttctgtttgctcaaatgacaaaaatgttgaatattcttgaggattacatgaat
tatagaaagtatagatatcttagactcgatggatcctccactataatggatcgtcgagat
atggtcagggacttccaacttcggagtgatattttcgtattcttgttgagcacaagagct
ggtggacttggcattaacttgacagctgctgatactgtcatcttttatgaaagtgattgg
aatccaaccctggatttgcaggccatggacagagctcaccgtctgggacagacaaaagat
gttactgtgtacagactaatttgcaaagagaccgttgaagaaaagattcttcaaagagct
agtcagaaaaacactgttcagcagcttgtcatgactggtggtcatgttcaaggagacata
ttagctcccgaggatgttgtatctttacttctggatgattcccagttggagcaaaaatta
atagaaattcctattgtggcaaaggatagacaaaagaaaaaacaagcaaagggtataaga
gttgatgctgagggtgatgcttcattggaggatttaatgaaccttgaatccgggggtact
gaatatgatcgatctcccgatctggaaaaaactaaatccagcagtaaaaagagaaaaggg
ggttctgaaaagcaaaattcatcaaaagctcgaagtttacaaaagataaacgaaactagc
ccagtggttgactttgacttggacgattaccagcaaaatctcgaacctcaaactcagaaa
ccaaagcgacccaagcgaccgaccaagagtgtaaatgaaaaccttgtaccagcaactacc
tccacaaacatgggaatttcagatcacactcagtatccacaatag
DBGET
integrated database retrieval system