Cucurbita moschata (crookneck pumpkin): 111435544
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Entry
111435544 CDS
T05248
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111435544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111435544
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111435544
Prokaryotic type
Archaeal type
TFB
111435544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
111435544
NCBI-ProteinID:
XP_022928717
UniProt:
A0A6J1EKQ3
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgttctgctctgactgtaagcgtcagacggaggttgttttcgaccattcc
gccggagacacggtgtgttctgagtgcggccttgtgcttgagtcgcactccattgatgag
acctccgagtggaggacttttgccaacgagtctggggataacgacccggttcgtgttggt
ggaccgacgaatccgcttttggctgatggtggcctctcgaccgtgattgccaagcctaat
ggtacgtctggggagttcttgtcctcgtctttgggtcggtggcaaaatcgtgggtctaat
ccagatcgagggctgattcttgctttcaagaccattgctactatgtctgataggttgggc
cttgttgcaaccataaaggatcgagccaatgaaatatataaaagagtagaagatcaaaaa
tctagtagaggaagaaatcaagatgctttattggctgcttgcttatacattgcttgtcga
caagaagataagccccgcacggtcaaggaaatttgctccgttgccaatggggcaacaaag
aaggagattggccgagcaaaggaatacattgtgaaacagttggggttggagacaggtcag
tctgtggagatgggaacgatacacgccggagacttcatgaggcgtttttgttctaatctt
gggatgaataatcaagctgttaaagctgcccaagaagctgtacagaaatctgaagagttc
gatattaggaggagccctatttccattgcagcagcagttatttacattatcactcagctt
tcagatgataagaagcctctgaaagatatatcagtagctacgggtgttgcagaagggacg
atcagaaattcatataaagatctgtatccgcacgtgtcgaagataataccgggttggtat
gcgaaagaggaggatcttaagaacctgtgcagtccctaa
DBGET
integrated database retrieval system
