Cucurbita moschata (crookneck pumpkin): 111435682
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Entry
111435682 CDS
T05248
Name
(RefSeq) protein SPA1-RELATED 2-like isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111435682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111435682
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
111435682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_HPS5
Pkinase
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_like
PK_Tyr_Ser-Thr
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_DCAF12
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
111435682
NCBI-ProteinID:
XP_022928913
UniProt:
A0A6J1EQG8
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MPGIRARSRLEVSSYRAVKYVKECEVSLERMEEVSEEMTLLDAAEDAHVQNKVRQDAQEN
EFSLKPENTNVVESQEMLIPIDGGYSQDYPHEFTEILEGKNLSRCKNTVKLSDQPECSPQ
CMDDAGVMVEELTVKNQNDSNLAIIGPSNNRARLLSRHNQWQHLYQLASGSGSGSSRMDT
SYKNNGQTVTPGIETGGYTSFPEAFAGRANRNDCGEKLEETKAIDNKGGDAHGSIRTKIL
SKSGFPEFFVKNTLKGKGIIRRGIPLEGFNVEHRNPKNARNAGGITLASDSSLQHDVKPV
IPSLNRKSERKFRGSALDGISLRDWLKVPHHKVNKSECLYIFKHVVELVDRYHARGVLLH
DLRPCSFRILTTNEIRYFGTFIQLKTAESLMVKDSQCSDSHQTQKRPLEQGNFLSFGVSP
KKQKDVQNMSLMAQHPHFPSESGVNLETANTRVCNKNASENYNEHFAEQGVRSKPAGPCA
YDSSLTPISGLLEEKWYASPEELNAGCCSPKSNIFSLGVLLFELLGKFESDGALVAAMSN
LRERILPPNFLADNLKEVGFCLWLLHPEPASRPTTREILESELINGIANVPAPELSTSID
EEDAESELLLQFLTSLNEQKRKHASKLMEDIRYLESDIEEVNKRHSSAKALDKSSLSNTV
NGRDSSIYHGGCLNSDGFSQVYTISHINEERIVKNISQLESAYFSMRSKVDPSKNDPAIR
TDKDLLRARENCYLLQKDDERSHGDRLGAFFDGFCKYSRYCKFEVCGVLRNGDFNSSSNV
ICSLSFDRDEDYFAAAGVSKKIRIFEFNSLFSDSVDIHYPAVEMFNRSKLSCVCWNSYIR
NYLASTDYDGVVKLWDATVGQEVSQFKEHEKRAWSVDFSQVHPTKLASGSDDCAVKLWGI
NEKKCLGTIRNIANVCCVQFSAHSTHLLAFGSADYRTYCFDLRNTKAPWCVLGGHEKAVS
YVKFLDSETLVSASTDNTLKLWDLNRTNPTGLSTNPCSLTLSGHTNEKNFVGLSVFDGYI
ACGSETNEVYAYHRSLPMPMTSYKFGSVDPISGKETEDDNGQFVSSVCWRGKSDMVVAAN
SSGCIKVLQMV
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaattcgtgctcggagcaggttagaggtgagttcttatcgggcagtcaagtac
gtgaaagaatgtgaagttagtctggagagaatggaagaagtgagtgaggaaatgacgcta
ttggatgcggcggaggatgcacatgtccaaaataaggttaggcaagatgctcaggagaat
gagttttcactgaaacctgaaaataccaatgtggttgaatcacaagaaatgcttattccc
attgacggtggctattcacaggattatcctcatgaatttactgaaattttagagggtaag
aatctgagtaggtgtaaaaacactgtgaagttatctgatcaaccagagtgcagtcctcag
tgtatggatgatgctggcgtaatggttgaagagctaactgtgaaaaatcagaacgattcc
aatttagcaattattggtccatcgaacaatagagcacgactgctttctaggcataatcag
tggcagcatctttaccagctggcaagtggttcaggcagtgggagttcacgtatggatact
tcttacaagaacaatggtcagacagtaacccctggcatagagaccggtgggtacacatct
tttcctgaggctttcgctggaagagccaatcgtaatgattgtggagagaaattggaagaa
acgaaggctattgacaataagggtggtgatgctcatggcagcattcggaccaagattcta
tcaaaatcgggctttcctgaattttttgttaaaaataccttgaaggggaagggaatcatt
cgtagaggtataccactggagggctttaatgtagaacatagaaaccctaagaatgcaagg
aatgctggtggcattacattggcatctgactcatcattacagcatgacgttaagcctgtc
ataccctccttgaataggaaatctgagcgtaaatttcggggttctgctttagatggcatt
agtctgagagattggcttaaagttccccaccacaaagtaaataaaagcgaatgcttgtat
atatttaagcacgtagtggagctggtggatcgttatcatgcacggggggttttgttgcat
gacttacgtccatgttctttcaggatattgacgacgaacgagataaggtactttggaact
tttattcaattaaaaacagcggaaagtctaatggttaaagatagtcagtgttcagatagc
catcagactcagaaaaggccgttagagcaagggaactttctgtcatttggtgtatctcca
aaaaaacaaaaagatgtccagaatatgagtcttatggcccaacatcctcactttccttca
gaatctggtgtcaatcttgaaactgcaaatacgagggtctgcaataagaatgcttcggaa
aattataatgaacattttgctgaacagggggttaggagcaagcctgctggcccttgtgca
tacgattcttccctgactccaataagtggcctattggaagagaagtggtatgcaagtcca
gaggaacttaatgcaggatgctgctcacctaaatcaaatatattctctcttggtgttctt
ctttttgagttacttggaaagtttgaatcagatggcgcacttgttgcagctatgtcaaat
ttgagggagaggattcttccgcctaactttctagcagataatttgaaggaagttgggttt
tgtctttggctacttcatcctgagcctgcatctcgtccaaccacaagggagattttagaa
tcagaactaatcaatggaatagcaaatgttccggcaccagagctttcaacatctattgac
gaggaagatgctgaatcagagttattattgcagttcctcacatcattgaatgaacaaaag
cggaaacatgcctcaaagttgatggaagacatacggtatttagaatcagatattgaagaa
gtcaataaaaggcacagttcagccaaagccttggataaatctagcttgtctaataccgtg
aatggaagggatagttcgatctatcatggaggatgtctaaactcagatgggttctcgcag
gtgtatacaatatcacatatcaatgaagagagaattgtaaaaaatataagtcagcttgaa
agtgcttatttttccatgagatcaaaagtagatccttctaagaatgacccagcaattcgg
acagataaagatttactgagagctcgtgaaaactgctatctactacaaaaagatgatgag
aggagtcacggtgatcgtctgggtgccttttttgatgggttttgcaagtattctcgctat
tgcaagttcgaagtatgtggggtactgagaaacggtgattttaacagttcctcaaatgta
atctgttccttgagttttgatcgggatgaggactattttgctgctgctggagtgtcaaag
aaaataaggatttttgagttcaactcactctttagtgattcggtcgatattcactatccc
gcagttgaaatgtttaatagatcaaagcttagctgtgtttgctggaatagctacatcagg
aattatctggcttcaactgactacgacggtgtggttaagttgtgggatgcaactgtaggt
caagaggtttctcaattcaaagaacacgagaagagggcgtggtccgttgacttttcacaa
gttcatcctacaaaattggccagtggaagtgacgattgtgctgtaaaactttggggcata
aatgagaaaaaatgtttgggcacaatcaggaacatagcaaatgtctgctgtgttcagttc
tctgctcactcaactcatttgctagcttttgggtctgccgattacagaacctattgcttt
gatctacgtaatactaaagccccctggtgtgtgttgggtgggcatgagaaagctgtaagc
tatgtgaaattcttggactcggagacccttgtttctgcgtccacagacaacacattgaag
ctgtgggatcttaatagaaccaatcctactggcttgtctaccaatccttgtagtttaact
ctcagtggccacactaatgaaaaaaatttcgtgggtctatccgttttcgatggctacatc
gcttgtggttcagaaacaaatgaagtatatgcttaccatagatctctgcccatgccaatg
acttcctacaagttcggttctgtcgaccctatttcgggtaaagagacggaggacgacaat
ggacaattcgtttcaagtgtatgctggagaggaaaatctgacatggttgttgcagccaac
tcaagcgggtgtataaaagtactgcaaatggtttga
DBGET
integrated database retrieval system
