KEGG   Cucurbita moschata (crookneck pumpkin): 111435865
Entry
111435865         CDS       T05248                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020  RNA polymerase
cmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111435865
  09124 Replication and repair
   03420 Nucleotide excision repair
    111435865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmos03021]
    111435865
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111435865
Transcription machinery [BR:cmos03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111435865
  RNA polymerase III system
   RNA polymerase III
     111435865
  RNA polymerase I system
   RNA polymerase I
     111435865
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111435865
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 111435865
NCBI-ProteinID: XP_022929200
UniProt: A0A6J1ETP8
LinkDB
Position
Unknown
AA seq 145 aa
MAELLFNDVFKVKCVNPDGKKYDKVSRIEARSEKLSMYMLLDVNTEIYPIDEGEKILMVL
SPTLNYDGAPVTSYSGQEGKKSLADKFEYIMHGKIYKLSDEGSGSDLKVEVYASFGGLQM
LLKGDPIHCAKFRVDQNMFLLLRKL
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcggagcttctatttaatgatgttttcaaggtcaagtgtgtcaacccagatggtaaa
aagtatgataaagtttcgagaatcgaagcacggagtgagaagctttccatgtatatgctg
ttggatgtaaatacagagatatatccaattgatgaaggtgagaagattctgatggtcttg
tctcccacgctgaactatgatggagctcctgttaccagctatagtggccaggaagggaag
aaatcgctagcagataagtttgagtatatcatgcatggtaaaatatacaaactttcagat
gaaggctcgggttcagacttgaaagtggaggtttatgcatctttcggaggactccaaatg
ctgttgaagggagatcccatccactgtgccaaattcagggtggatcagaacatgtttttg
ctcctccgaaaactctaa

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