Cucurbita moschata (crookneck pumpkin): 111435888
Help
Entry
111435888 CDS
T05248
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111435888
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111435888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
CTK3
FlgT_M
CREPT
UPF0242
Motif
Other DBs
NCBI-GeneID:
111435888
NCBI-ProteinID:
XP_022929239
UniProt:
A0A6J1EM93
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRCKAELVVATWDKQFHNSEMAQKVPL
LYLANDILQNSKRKGNEFVSEFWKVLPSALKDVLDHADNHGKNVISRLVDIWEQRKVFGS
RTRSLKDVILREEAPPPLEFSKKRTRSVRIVKRDSRSIRTKLSIGSAAEKIVSAFYLVLS
ECSNEETEMTNCNSAVQRVRKMENDVDFACSVAKNPQRKKLAKELEEEESILKQCIQKLQ
SVEGNRMALISHLKEALHVQESELENIRTQMQVAQAQAEEAKNMQNRLNDEGYLSKRSTI
DSNAKAGRSPNKSAAAIAAEVADKLAASSSSQMIMTSVLSTFAAEEAKNTVLTKTNNGSN
AFTPNPVRSANSITKPEASAIVSDPNVFMSMQPLPAPANHSYQSVMVPQPAMQSQAPNSQ
TPYQLLPNAPSQQYMQLSNGVLTPYGYGSLPSSTPVPPPPIPRMVSPMVPLTQQMLQQPM
PLAQQPSPMIQTQPVPFAQQPLAPSFRPLQPPGMVYYGHPPPSQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgtcttcagcgagcaaatacttgctgataagctgtcgaagctcaatagcacg
cagcagtgtattgaaactttatcacattggtgtatatttcatagatgcaaggctgaactg
gttgttgcaacatgggataaacaattccacaattcagaaatggcccagaaagttcctctt
ctgtatcttgctaatgatatcttacaaaacagcaagcgtaagggaaatgaatttgtttcc
gagttctggaaggttcttccatcagcgcttaaggatgttcttgaccatgctgacaaccat
ggaaagaatgtgatttccagattggtagatatatgggaacaaaggaaggtatttggatcc
cgaactcgaagcctcaaagatgtaatacttcgggaagaggcacctccgcctctagagttt
agtaaaaagcgtactcgatcagtcagaatagtcaaaagagattcaaggtcgattagaaca
aaattgtctattggaagtgcagctgaaaaaattgtatcagcattctacctggttttgagt
gaatgttctaatgaagaaactgagatgaccaactgtaactctgcagttcaacgtgtacgg
aagatggaaaacgacgtggattttgcttgttccgtggcgaagaatcctcagcgtaagaag
ttagccaaagaactggaagaggaagaaagtattctgaaacagtgtattcagaaactacaa
tcagttgaaggcaatcggatggcacttatatctcatttaaaagaagccctgcatgttcag
gaatcagagctagagaatattcgaactcagatgcaggtagctcaggctcaggcagaggag
gctaaaaatatgcaaaatcggttaaacgatgaaggttatctatcaaaacgttccacaatc
gattcaaatgcgaaagctggacggagtcctaacaagtctgctgcagccattgcagcagag
gttgccgacaagctcgcagcttctagctcatctcaaatgatcatgacatcggttctctcc
acatttgcagctgaggaggcaaagaatactgttctaacaaagaccaataacggatcgaat
gcgttcacgcccaaccccgtgcgctctgccaattctattacaaaacctgaagcatcagcc
attgtttcagatcctaatgttttcatgtctatgcagccccttcctgcaccagctaaccat
tcatatcaatcagttatggtgccccaaccggcaatgcaaagccaagcccccaattcacaa
actccatatcagttgcttccgaacgcgccttcccagcaatatatgcagctctcgaatgga
gtcttaaccccatatggttatggtagtcttccaagctcgactccggtaccaccaccgcct
attccccgtatggttagtccaatggtgcccctgactcagcagatgctgcaacagccaatg
cccttagctcagcagccatcacctatgatacaaacacaaccagtccctttcgcacagcaa
ccattagcacctagtttccgaccgcttcagccgcccggtatggtgtattatggacaccct
cccccttctcagtga
DBGET
integrated database retrieval system