Cucurbita moschata (crookneck pumpkin): 111435988 Help Entry 111435988         CDS       T05248                                  Name (RefSeq) vam6/Vps39-like protein   KO K20183   Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos04148   Efferocytosis Brite KEGG Orthology (KO) [BR:cmos00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     111435988  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:cmos04131]     111435988 Membrane trafficking [BR:cmos04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     111435988 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Vps39_1 CNH zf-Vps39_C Clathrin zf-HC5HC2H TPR_WDR35 AlaDh_PNT_N zf-HC5HC2H_2 DUF2175 Motif Other DBs NCBI-GeneID:  111435988 NCBI-ProteinID:  XP_022929405 UniProt:  A0A6J1EUB2 LinkDB All DBs Position Unknown AA seq 1000 aa AA seqDB search MVHSAYDSFELLKDNPSKIESIESYGSKLLIGCSDGSLRIYSPKSSGSDRSPTSDFHSMS MELQKEPYVLEKNVTGFSRRSLVSMKVIDSRELLLTLSESIAFHKLPNLETLAVITKAKG ANVYSWDDRRGFLCFARQKRVCIFRHDGGRGFVEVKEFGVPDTVKSMSWCGENICLGIRR EYVILNATSGALTNVFPSGRLAPPLVVSLPSGELLLGKDNIGVFVDQNGKLLQEGRICWS EAPSVVVIQKPYAIALLPRYIEIRSLWSPYALIQTIVLRNGRHLIDSNHALVVGLDNSAY GLFPVPLGAQIVQLTASGNFEEALALCKLLPPEDSSLRSAKESSIHIRYAHNLFDNGSYE EAMEHFLASQVDITYVLPFYPSIALPKTTLITETEKLMDMTLDDPHLSGGSSGFSDEMES PPHQLLESDGNASLESKKVNHNTLMALIKFLQKKRHNIIEKATAEGTEEVVLDAVGDRYK KSYKGRGNIPISSGAREMAAILDTALLQALLFTGQSFAALELLKGLNYCDVKICEEILQK NKHYSALLELYRCNSMHREALKLLHQLVEESKTSESQTELTQKFKPEMIIDYLKTICGTD PMLVLEFSMTVLESCPTQTIELFLSGNIPADLVNSYLKQHAPNLQATYLELMLAMNESSI SGNLQNEMLQIYLSEVLDWYANLSAQHKWDEKTYSPTRKKLLSALETISGYHPEILLKRL PPDALSEERAILLGKMNQHELALSLYVHKIHAPELALSYCDRVYESVANQQPTKSSGNIY LTLLQIYLNPRRTTKYFEKRITNLTSPQNMGTPKLGSGPSSKVKGSRASKKIAAIEGAED TKISLSNTESCRSDGDTDEIGEEGSSSIMLDEAMDLLSQRWDRINGAQALKLLPKETKLQ NLLQFLGPLLRKSSEAYRNSSVIKSLRQSENLQVRDELYNQRKSSIKITSDSMCSLCKKK IGTSVFAVYPNGKTLVHFVCFRDSQNMKAVSKGSPIRRRT NT seq 3003 nt NT seq  +upstreamnt  +downstreamnt atggtgcacagtgcttacgattccttcgagctactcaaggataatccctccaaaatcgaa tccatcgagtcttacggctccaagcttttaatcggttgttctgatggatctctccgtatt tactccccgaaatcctccggttccgaccgatctccgacgtctgatttccactccatgtcg atggagctgcaaaaggaaccatatgtactggagaagaacgtcacaggattctcccggcgg tctttggtgtcaatgaaggtaattgattccagggagctccttttgactctctccgagtca atcgcgtttcacaaacttcccaatttggaaactcttgctgtaattaccaaggccaagggt gccaatgtgtattcctgggatgaccgccgaggcttcttgtgctttgccaggcagaagagg gtctgtattttcagacacgacgggggacgaggattcgtagaggttaaagaatttggtgtc cctgacacagtgaagtcaatgtcttggtgtggagaaaatatttgtttaggaattagaaga gaatacgtgatattaaatgctaccagcggcgcattgactaatgtatttccttctgggagg ttagccccacctctggtagtgtcactaccttctggagaacttcttcttggaaaggataac attggcgttttcgtggaccaaaatgggaagcttcttcaagaaggtcggatttgttggtca gaggcaccttctgtcgttgtcatacagaagccctatgccattgctttgttgccaagatat attgagattcggtctctctggtctccatatgcattgatacaaaccattgtccttcgaaat ggtcggcatcttattgacagtaatcatgctctggttgttggtttagacaattctgcctat ggcctcttccctgttccccttggtgcacagattgtacaactaacagcgtctggtaacttt gaggaagcgttggctttatgcaagttgcttccacctgaagattcaagccttcgatctgca aaggagagttccatccatatcagatatgctcacaatctttttgataatgggagctatgag gaggcgatggaacattttttggcatctcaagtggatataacctatgtgcttcccttttat ccttcaattgcccttccgaagactactttgattactgaaacagagaaattgatggatatg actttggatgatcctcacctttccggaggttcttcaggtttttcagatgaaatggagtca cctccacaccaactactggaatctgatgggaacgcatcattggaatcaaaaaaagttaac cataatactctcatggctctaattaagttcttgcagaagaaaaggcacaacattattgaa aaagccactgctgaagggacagaagaggtagttttagatgctgttggagaccggtataag aaatcttataagggacgagggaacatccccatcagctctggtgccagggagatggcagca atactggatactgcgctacttcaagctctgctttttactggacaatcatttgcggctttg gaattattaaaaggcctgaattactgtgacgtcaaaatatgtgaagagatcctccaaaaa aataaacattattccgccctgttagagctgtaccgatgcaattccatgcatcgcgaagct ctaaaacttttgcatcaattagtagaagaatcaaaaaccagtgagtctcaaactgaactt acccaaaagttcaaacccgaaatgatcattgactatcttaagacaatttgtggaactgat cccatgctggtcctggaattctcgatgactgttcttgaaagctgtcccacgcaaactatt gagctctttctttcaggaaatattcctgcagacttggtcaattcctatttgaagcaacat gctcctaacttgcaggccacatatttggaacttatgctcgcaatgaatgagagttcgatt tctggaaatctccaaaatgaaatgcttcaaatatatctttcagaagttctcgactggtat gccaatttaagtgctcaacataaatgggatgaaaaaacttactcccccacaagaaagaag ttgttgtctgctttggagacaatctcagggtatcatcccgagattctattaaaacgtctt cctcccgatgcattatctgaagaacgagcaattttattggggaagatgaaccagcatgag cttgccttatctctctatgttcacaagatccacgctccggagttggcgctgtcctattgt gatcgggtttatgaatctgtagctaaccagcaaccaacaaaatcttctggcaatatatac cttactcttctacaaatatacctcaacccccgcagaacaacaaaatattttgagaagaga attactaatttgacatcccctcaaaatatgggcactccaaaacttgggtcaggtccttca tccaaagttaaaggaagccgtgcatctaagaaaattgctgcaatagaaggtgcagaagac acgaaaattagccttagtaacactgagagttgcaggagcgacggcgacacagatgaaatt ggtgaagaaggaagctcttcaattatgcttgatgaagctatggatctgttgagccaaagg tgggacagaattaatggagcgcaggcactcaaacttctaccgaaggagacaaagttacag aacttgcttcaatttcttggaccgcttttaaggaaatccagtgaggcgtacaggaactct tcagtgataaagagtttgcggcaaagtgaaaacttgcaggtgagagacgaactctataac caaaggaaatcttcaataaaaataaccagtgatagcatgtgctccctttgcaagaagaaa atagggacgagcgtcttcgcagtctatccaaacgggaaaacgctcgtgcactttgtctgc tttagagactcacagaacatgaaggctgtgtcgaagggttcacccataaggaggcgtaca tga

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