Cucurbita moschata (crookneck pumpkin): 111436026
Help
Entry
111436026 CDS
T05248
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111436026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111436026
03009 Ribosome biogenesis [BR:
cmos03009
]
111436026
04131 Membrane trafficking [BR:
cmos04131
]
111436026
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111436026
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111436026
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111436026
Membrane trafficking [BR:
cmos04131
]
SNARE
SNARE associated proteins
Others
111436026
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111436026
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111436026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
nSTAND_NTPase5
Parvo_NS1
AAA_18
ABC_tran
Vps4_C
Viral_helicase1
NB-ARC
AAA_7
NACHT
TsaE
IstB_IS21
DUF815
ResIII
AAA_lid_PRS2_C
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
111436026
NCBI-ProteinID:
XP_022929462
UniProt:
A0A6J1EMV1
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MADPTGSSASDKAHASSHSSSDQQNTKRDFSTAILERKKSPNRLVVDEAINDDNSVVSLH
PVTMEKLQFFRGDTILLKGKKRRDTVCVVLSDEQCEEPKIRMNKIVRANLRVRLGDVVSV
HQCPDVKYGKRVHILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVE
FKVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRELVELP
LRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESE
SNLRKAFEEAEKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTRAHVIV
IGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERVARDT
HGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGSSNPSA
LRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG
KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA
TQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLI
YIPLRDESSRLQIFKACLRKSPVSKDVNLSALSRYTHGFSGADITEICQRACKYAIRENI
EKDLERERKMRENPEAMEEDDIDEVSEIKAAHFEESMKYARRSVSDADIRKYQLFAQTLQ
QSRGIGSEFRFPDRTDNVTAGAADPFSSAVAAGDDDDLYS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccaacaggttcatcagcttcagataaggctcatgcatcctctcattcttca
tcggaccagcaaaacactaaacgggatttttccactgcaattttggaacgcaagaagtct
ccgaatcgtttagttgttgatgaggctatcaatgatgataactctgtggtttctttgcat
cctgttaccatggaaaagctgcagttctttagaggagatactattttattgaaggggaag
aagcggagagatacagtgtgcgttgttctttccgatgagcaatgtgaagagccaaaaatc
agaatgaataaaattgtacgagccaatctcagagttcgtcttggagatgttgtatctgtc
catcagtgtccagatgtgaagtacggaaagcgggttcacatcctccctgttgatgataca
atcgagggtgttactggcaacctatttgatgcatatttgaaaccttatttcttggaagca
tatcgacccgttaggaagggtgacctgttcttagtcaggggtggaatgagaagtgttgag
ttcaaggtcatagagacagaccctggtgaatactgcgttgttgcacccgataccgagatc
ttctgtgagggagagcccatcaaacgtgaggatgaggagagattaaatgaagtcggatat
gatgatgttggaggagttaggaagcaaatggctcagatccgtgaattagtggaattacca
cttagacatccgcaacttttcaaatcgattggcgtaaagcctccgaaagggatattgcta
tatgggcctcctggatctggaaaaactcttatagccagagctgttgctaatgagacgggt
gcatttttctttctgattaatggtccagaaataatgtctaagttagctggtgagagtgaa
agcaatctgaggaaggcgtttgaggaagctgaaaagaatgccccttcaattatatttatt
gatgaacttgattccattgctccaaagagggagaaaacacatggagaagtggaaaggcgt
atcgtatcccaacttcttaccttgatggatggcctcaaaactcgagcacatgttattgtt
atcggagcaacgaacagacccaacagcattgaccctgctttgaggagattcggaagattt
gatcgagagattgatattggtgttcctgatgaagtaggacgattggaagtccttaggatc
catacaaagaacatgaaacttgccgaggatgtggatcttgaaagagttgcacgggatact
catggttatgtcggtgctgatctcgccgctctttgtactgaagcagcactccagtgtatt
cgcgagaaaatggatgtcatcgacttggaagatgaaacaattgacgctgaggttttgaat
tccatggctgtaactaatgaacatttccaaactgctttagggtcttcgaatccttcagcg
ttgcgggaaactgtcgtggaggttccgaatgtttcgtgggatgatatcggtgggttggaa
aatgttaaaagagagctgcaggagactgtccaatatccagtggagcatcctgagaagttt
gaaaaatttggcatgtcaccatctaaaggtgtcctcttttatgggcccccgggctgtggt
aagacgctgctggctaaggcaattgccaatgaatgtcaggccaactttataagtgtgaaa
ggacctgagttactgacaatgtggttcggtgaaagtgaggcaaatgtgagagagatattt
gacaaggctcgtcagtcggctccttgtgtactatttttcgatgaactcgattctatcgca
actcagcgtggtagttctgttggggatgctggtggtgcagcagatagagtcttgaaccaa
cttcttacagaaatggatggcatgactgcgaagaagaccgtgtttataattggggcgaca
aacaggccagacattatagacccggcgctgctcaggccgggacgtctggaccaactaata
tacatcccgctccgggacgaatcttcacgtcttcaaattttcaaagcatgtctccgaaag
tcgccagtgtcaaaagatgtcaatctatcagctctttcacggtacacccatggctttagt
ggagctgatatcactgaaatatgtcagcgtgcctgcaaatatgccattagagaaaatatc
gaaaaggatcttgagagggagagaaagatgagagaaaacccagaagccatggaggaagac
gacatcgacgaagtctcagagataaaggcagcacattttgaggagtcaatgaagtatgct
cgtagaagtgtcagcgatgcagacatcaggaagtaccagctgtttgctcagaccctacag
caatctcgtgggatcggatcggaatttcggttccccgatcgaaccgacaacgtaactgca
ggagcggctgacccattttcttccgctgtagctgctggagatgatgatgatctttacagc
tga
DBGET
integrated database retrieval system
