Cucurbita moschata (crookneck pumpkin): 111436297
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Entry
111436297 CDS
T05248
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111436297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111436297
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
111436297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
Motif
Other DBs
NCBI-GeneID:
111436297
NCBI-ProteinID:
XP_022929795
UniProt:
A0A6J1EVB0
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MIMEQDRGEGAKVRVLIEKATNSTDSEVHPRLLKAIKSVVRSSDSELRVAAQTLMDLMKR
DHSQVRYLTLLVIDELFMRSKLFRSLVVENLDQLLTLSVGFRRDVPLPAPAAVASILRSK
AIEFLEKWNDSFGIYHRQLRLGYDYLRNILRFKFPNIQANAARRQQERMKRERRSKEILL
SKFEMLKGNFSSIKEEIQSTLDEIKECLDIVHSKEDSKAMIPLDDDITEDFRPSELRQIR
LDALKEGEMVHENNDNKVIFDALREVYKLMSKHLVSIKEWISVLVRVDSTDTRFRDSALR
EFIDIRNSLCAVKKRCEESGCTFTESANHDDKDEDFWEEGPVGATENGDSVAYERKKEDV
AMNGGTFTYERKNEDLVVAPTSNVIKNAGTETISEAHVGKAVQNGEVGSSDSAPSLRNKL
LADAPVIEWGSFLNTWDSKMDILANQRGLELESHWGRVDYDATIPAEKIAELNVRASLYK
EDQPEIQPCRAPLRKGGLCQRRDLRVCPFHGPIVPRDDEGRPFDTSSSLDETTPPDQEMG
SVEKLVKQAVKNVRARDKEAVAKRERDKQALKRAKLAKIREHNEAVLRDAAVASTSRSSG
LGECMETTGEMRGSAGKKKKTLASMLRKKTLTKDRISQRLLGIRSRDSTQRQLTLSQGAN
YGDAFPNQW
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggagcaagaccgaggagagggagctaaggttagggttttgatcgagaaggct
accaactccactgattccgaggtccatcctcgcctcctcaaggccatcaaatcggttgtt
cggtcttccgactctgagctccgagtcgccgcccaaactcttatggaccttatgaagcgc
gaccattctcaggtccgctatctcacacttctggtaattgatgaacttttcatgagatca
aagctttttagatcccttgttgttgagaacttggatcaattgttgacattaagtgttgga
ttcagaagagatgtgccacttcctgcaccagcagctgttgcatctatattacgttcaaag
gcaatcgagtttttggagaagtggaacgattcttttggtatttaccacagacagcttaga
ttaggttatgactacctaaggaacattcttcgattcaagtttccaaacatacaggcaaat
gcagcacggcgtcagcaagagagaatgaaaagagaaagaaggtcaaaagagatacttctt
agcaagtttgaaatgttgaaagggaatttttcttctatcaaggaagagattcaatcgact
ttagacgagatcaaggagtgtttggatattgttcattctaaagaggattccaaagccatg
attcccttggatgatgacatcacagaagactttcgaccttccgagctaagacagattcgt
cttgatgcactgaaagaaggggaaatggttcatgagaataatgataataaagtgattttt
gatgcattaagggaggtttacaagctcatgtcaaaacatctggtttccatcaaagagtgg
atttctgttcttgttagggttgactcaacggacacaagattcagggattcagccttaagg
gagttcatcgacatacgaaatagtctatgtgcagtgaagaagagatgtgaagaatcgggt
tgtacttttacagagagtgcaaaccatgacgacaaagatgaagatttctgggaagaaggt
ccggtgggcgcaacggagaatggagattctgttgcatatgaaaggaaaaaagaagatgtt
gccatgaatggaggtacctttacgtacgaaaggaaaaatgaagatcttgttgtggcgcca
acatccaacgtgattaaaaatgcaggcactgaaaccattagtgaggcacatgttggcaag
gcggtgcaaaatggcgaagttggtagtagtgattcagccccctccctaaggaataagctc
ttagctgatgctccagttattgaatggggctctttcttaaatacgtgggactccaagatg
gatatcctggctaaccagcgaggattagagcttgaaagtcactggggtcgagtagactac
gacgcaacaattcctgcagagaaaattgcagaactaaatgtccgggcttcactgtacaag
gaagatcaacccgaaattcaaccatgtcgggctcctttaagaaaaggaggactttgtcag
agaagggatctaagagtgtgcccatttcatggacctattgtgccgcgtgatgatgaagga
cgaccattcgacacgagctcttcattggatgaaacaactcctcccgatcaagagatggga
tccgttgaaaagttagtgaaacaggctgtgaaaaacgtacgtgccagagataaagaggca
gtggcgaagcgagaacgtgacaaacaagcactgaaacgtgccaaacttgcaaagattaga
gagcacaatgaagctgttttgcgcgacgctgcagtggcatcgacatcaagatcttctggt
ttgggcgagtgtatggaaacaactggtgaaatgaggggatcagctgggaagaagaagaaa
acacttgcatcgatgctgcgtaagaagacgttgacaaaagatcgaatatcgcagaggctt
ttaggcataaggtccagggattcaactcagaggcagcttacactgagtcaaggagctaac
tatggcgatgcattcccaaatcagtggtaa
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