KEGG   Cucurbita moschata (crookneck pumpkin): 111436946
Entry
111436946         CDS       T05248                                 
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111436946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmos03009]
    111436946
Ribosome biogenesis [BR:cmos03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    111436946
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Utp12 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 WD40_Gbeta Beta-prop_Vps41 Beta-prop_VPS8 Beta_prop_At2g24240 Beta-prop_HPS5 PQQ_2 Beta-prop_WDR19_1st Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 111436946
NCBI-ProteinID: XP_022930515
UniProt: A0A6J1EX27
LinkDB
Position
Unknown
AA seq 626 aa
MASSNIRDLLTSFSPDLHLFAISSGDGRIKIWDTLKGQIQTEFADFFTTDSTSILTKSGK
GHLSVDYKCMKWLSLEKKRKRKRQCSLLLLGTGSGDVMALDVAAGELKWKISDCHPGGVA
TISFPTHGSCIYTAGADGMLCEIDSVTGSLLRKFKASTKAISCISVSPDGKKIATAASQM
KIFNCSDHKKIQKFSGHPGAVRCMVFTEDGKYILSSGVGERYIVVWSLGGEKKQSASCVL
AMEHPAIFVDSRRSGGGGVDEAALYVLAISEIGVCYLWYGQNLEELRSVKPTKVLISNND
ISSKSKKRVTPSIYAAQFQGIPKSGSGQVFLAHGLLVKPSFQNVMVHSGTDITLNSSNDG
ILLPSHSVGKSKKVLDVQGGVVALDRANAEDALRPIPKVFDSQEKRTLYHDLHVDRDDVM
TELVDSGSQVKDVVGVEDSAAVCLEDKLRSLGILDSTDDHTSDSILKSAIFKGIDLEANM
SQKKLREAVLSLAPGDACKLLGNLVSIWQSRLRSGKNVLPWIYSLLLNHNQHILSQEQST
QILDSLFKITKSKETAVQPLLQLSGRLQLVLAQIERASANKTDQTVRHGPEIDGGESSND
EDDEEVDDVLYGEEEYESELSSDNEN
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcgtcgtcgaatatcagagatctgttaacatcttttagtcctgatttgcatttgttt
gccatcagctcgggagatggtcgtatcaagatctgggacacgttgaaaggtcagatacag
acggagtttgcagatttctttacaaccgattcaacgagcatactaacgaaatcaggaaaa
gggcatctatctgttgattataaatgcatgaaatggttgtcattggagaaaaagagaaaa
agaaagcgccaatgttcgttgttgttgttaggaactggtagtggtgatgttatggctctt
gatgtagcagctggggaattgaagtggaaaataagtgattgtcatcctggtggtgttgct
acaatttcgtttcctacacacggttcgtgcatttatactgctggtgctgatggaatgcta
tgcgaaattgattctgtgacgggaagcctgttgaggaagttcaaggcttcgacaaaggca
atatcctgtatttctgtttctccagatggaaagaaaatagcaactgcagcctcgcaaatg
aagattttcaattgttctgatcacaaaaagatacagaagttttccgggcatcctggagct
gttcgatgtatggtttttaccgaagatggaaaatacattctttcatccggggttggtgaa
aggtatatcgttgtttggagtttaggcggagagaaaaagcaatcagctagttgtgttctc
gcaatggagcaccctgccattttcgtggacagcaggcgctcgggtggtggtggagttgat
gaagctgcgctgtacgttttggctatatcagaaattggtgtttgttatttatggtatgga
cagaatctcgaagagttacgaagtgtcaagcctactaaagtattgatatctaacaatgat
atttcctccaagagtaaaaaacgggtaacaccttctatttatgctgcacaatttcaagga
attccgaaatctgggtcgggccaggttttccttgctcatggattgctggtgaaaccttca
tttcaaaacgtcatggtgcactccggtactgacataactttaaacagctccaatgatgga
attcttctgccgagtcattcggtcggaaaatctaagaaggttttagatgtacagggagga
gtcgttgcattagatcgagctaatgctgaagatgccttgcgtccaattccgaaggttttc
gattctcaagagaaacgtaccttatatcacgatttacatgttgaccgcgatgatgttatg
accgaattggtcgacagtgggagccaagtaaaagatgttgtcggagtggaggactctgca
gcagtttgcctggaggacaaactccgatcgttgggcatacttgacagtacagacgatcat
acatctgactccatccttaagtctgcaatattcaaaggcatcgatcttgaagctaatatg
tcacagaaaaagttaagagaagcggttttatcgttagcaccgggcgatgcatgcaagttg
cttggtaacttggttagcatctggcaatccaggttgcgtagcgggaagaacgtcctaccg
tggatttatagtttattgttgaatcacaatcaacatatcttgtctcaagagcagtcaacc
cagattcttgattctttgtttaagattactaaatccaaagagactgcagttcaacctctt
cttcaattatcaggtcgtttgcaactggtgttggcacaaattgaaagggcgtcggccaac
aaaaccgaccagacggtacgacatggtcccgagatagatggaggggagagcagcaacgac
gaagacgacgaagaagtcgacgatgttctttatggggaagaagaatatgaatctgaatta
agcagtgataatgagaattag

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