Cucurbita moschata (crookneck pumpkin): 111437510
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Entry
111437510 CDS
T05248
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111437510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111437510
03036 Chromosome and associated proteins [BR:
cmos03036
]
111437510
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111437510
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111437510
PBAF complex
111437510
GBAF(ncBAF) complex
111437510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
111437510
NCBI-ProteinID:
XP_022931284
UniProt:
A0A6J1ETV7
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MEEKRRDAGNLPANTTDSPSSEPPSSRRRAGAQKRKVSALGGSNSSSAPSKRVTRDKFAL
SHPPNHNGPFTRARLGPNNGAGTASGNAAGGLSAAGSVKVEGSFLHSEAQRGDTLVAAAE
ELNKASRLANLEASFVADFESIKSRGTNAHVVPNHCGWFSWTKVHPIEERSMPSFFSGKS
GTRSPDIYIEIRNWIMKKFHANPSTQIESKDVSEMEIGELDARQEVMEFLDHWGLINFHP
FLSADSTSTSDVDDEDQKDSLVEKLFHFETLESSPSVVPKTNVTIAPPRLLRESAISEEM
VRPEGPSVEYHCNSCSGDCSRKRYHCQKQADFDLCSECFNNGKFDSDMSSSDFILMESAE
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDSFLESE
NNDEVSAKETVVPPSIENDSSVPMDITELMDNKTTGKEASNVENASKEDTVEVKVGQDNS
KSKDVEVKAALDNSKTEDGGQKVSEDIALNALREAFEAIGYVLTSDQHPLSFSDVGNPVM
ALAAFLARLVGSDVVSASAHFSLKSMSQKSPSLDLATRHCFILEDPLDDKAQANSERVVN
VEAQQNVNEQCEKQRKDNSTSVLDDSALSTTNSIYKNGESVTEETTMENRNSADATKEHD
PMVNHGSDVTNKLKELTEPEVPKDDRTSIVKETENMESKLTTNTVQKLGEETSVEKPSQS
TLLSKDIHMSDLRNAEKTEIQKQVPSPSVNTSKIDDVPNPLPSVNELQPLVAANSVKVAS
SDVAMVSDPRDKNEPAQTETSKSVVDQGASKVSDSLPTEENAPPQPVKPNPVIDKGTDDN
QSKNNEEENSKCTSKKEEKIDKLKRAAVTTLAAAAVKAKVLANQEEDQIRQLAMILIEKQ
LHKLESKLAYFNDMDNVSMRIREQLDRSKQRLFQERAQIIAARLGVPASASRGVAPPGNR
MAMNFPNSVPRPPMGMAPQRPPTSGPRV
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcgccgagacgccgggaatttaccggcgaacaccacggattcgccttca
tcggagccgccttcgtctcgccgtcgagctggagctcagaagcgaaaggtcagcgctctc
ggtggctctaactcctcatccgctccctcgaaacgcgttactcgggacaaatttgctctt
tcgcaccctccaaatcacaacggtcctttcactagagctcgacttggccctaacaatggc
gctggaacagcatcgggtaatgcggctggaggtctctccgccgcgggatcagttaaggtg
gagggatcttttcttcattccgaagctcagcgtggagacacactggttgccgcggcggag
gaattgaacaaggcgagtagattggcgaatttggaagcgtctttcgtagctgatttcgaa
tctattaaatctcggggtacgaatgctcacgtcgttccgaatcattgcggttggttttca
tggacaaaagtccacccgattgaggaacgctcgatgccttcttttttcagtggaaagtct
ggcactcgaagtcctgatatttatattgagatacgtaattggattatgaaaaaattccat
gcaaatcctagtacgcagattgaatcaaaagatgtatcagagatggaaatcggagaacta
gatgctagacaggaggtgatggagtttctagaccattggggtttgattaattttcaccct
ttcctatctgcagattcaacttcaacaagtgatgttgatgatgaagatcaaaaggactct
ttggttgagaagttgtttcactttgaaacattagaatcctctccatctgttgttccaaag
actaatgttaccatcgctccaccaagattgcttcgagaatctgcaatttctgaagagatg
gtgaggcctgagggtccatctgttgagtaccactgtaactcgtgctctggtgattgctct
cggaaacggtaccactgccagaagcaggcagattttgatttatgttcggagtgctttaac
aatgggaagtttgattctgatatgtcttcatcagattttattctcatggagtctgctgag
gttcctggtgctagtggaggtaagtggacagatcaggaaactctcctccttcttgaggct
ttagagctatataaggaaaactggaatgagattgcagaacatgtggccaccaaaacaaag
gcccaatgtatattgcacttcattcaaatgccaattgaagatagctttcttgaatctgag
aacaatgatgaagtcagtgcaaaagaaactgttgttccaccgtcaattgaaaatgattcg
tcagttcccatggatatcactgaattgatggataataagactactggaaaagaggcctcg
aatgtagaaaatgccagcaaggaagatacagttgaggtaaaagttgggcaggataattca
aaatcaaaggatgttgaagtaaaagctgctttagacaactcgaaaacagaagatggtggt
cagaaggtttctgaagacattgccttgaatgctttgagggaggcatttgaagccattggt
tatgtattaacatctgatcagcacccactttcattttctgatgtagggaaccctgtcatg
gcactggctgcattccttgcacgcttagttggatctgatgttgtcagtgcatcagctcat
ttttccttgaaaagcatgtctcagaaatctcccagtttagatctggctacaagacactgc
tttattttagaagatccactagatgacaaggcacaagctaattcagagagggttgtcaat
gtggaagctcagcaaaatgtcaatgaacagtgtgaaaaacagaggaaagacaattctact
tcagttttagatgatagtgccttatcgactactaacagtatttacaaaaatggagaatct
gtgacagaggaaactacaatggagaatagaaattctgcagatgctactaaagaacacgat
ccaatggttaatcatggttcagatgtaactaataaattgaaagaactgacagaaccagaa
gtgcccaaggatgatagaacaagcattgttaaggaaactgaaaatatggaatcaaaattg
acaacaaatacagttcaaaaattgggagaagaaacttctgttgaaaagccatcacaatct
acgttgttatcaaaggatatacatatgtcagatctacggaatgctgaaaaaactgagatt
cagaaacaagttccatctccttctgtcaatacttcaaaaatagatgatgtgccaaatcct
ttaccttccgtgaatgaacttcagccactggttgctgccaattcagtgaaagtagcctca
agtgatgtagctatggtatctgatcctcgagataagaatgaacctgcacaaactgaaaca
tctaaatctgtggttgaccagggagcaagcaaggtctctgattctttgcccacagaagag
aatgcacctccacagccagttaaaccaaatccagttattgataaaggaacagatgataat
caaagcaagaacaatgaagaagaaaattccaaatgtacaagtaagaaagaggaaaaaatc
gataagctgaagcgtgctgcagttacgacgcttgcagcagcagctgtgaaggcaaaagtt
ctggctaatcaggaagaggatcaaattcgtcaacttgccatgatattaatcgagaaacag
ctgcataagttggaaagcaagttagcatacttcaacgatatggacaatgtgtcgatgaga
atcagagagcaactggacaggtcaaagcaaaggcttttccaggaacgtgcgcagataatt
gctgctcgactcggcgtacctgcttcagcatcacgaggtgtggcaccaccaggaaacaga
atggctatgaacttcccaaactcagttccaaggcctccaatgggcatggcgccccaaagg
ccaccgacttctggaccacgggtatag
DBGET
integrated database retrieval system
