Cucurbita moschata (crookneck pumpkin): 111437649
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Entry
111437649 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111437649
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111437649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111437649
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111437649
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111437649
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
111437649
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
111437649
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
111437649
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
111437649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
111437649
NCBI-ProteinID:
XP_022931485
UniProt:
A0A6J1EZJ5
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MGEKVVTASGKDRSIPRNLNVHKFVDPRASELEALQSIILNRMNSNTCDQRSKRRRTSSY
LTNASRKRKNKKMKMDTTHLDLAKNEKKASRKIRRRAELKMNHGIGFSTSGDGTKRLRTH
VWHAKRFTMTKLWGFHLPLGLQGRGKGSRALLKWYNDGVLIHDASYYVPVQLEGPEDSLI
SALGMVLEPSIVSHSQDISHAIISGVIYGRAILHDIRVPGATAIAPVTYMWRPCPYRKKE
INVNNHNCSVFKTMDGIDASSTSRQLWVWLHPSASCEGYDALKFACQKEMDEKNIPIYCS
SLEGQLAKLEVFGSNASQLLENLLHPMTRASQNLWQLKKHSTGGPDGNSHLKTLFNCENE
NYIPSYGIASIAFKDPRMLPNEKTTDVQDSTSMHNPADSSAILSEDKEIPKSNEMLSSLD
SRIDENGFLLENKELWDAKSGMRAPVEDTVICAARHHTRMNRFCLDEPSAEMAKDLSSLQ
CSSACPTLLLNENDESSTLLRWSIILPVSWVKAFWIPLISKGARAIGLRERHWIACEVGL
PSFPWDFPDCTAYSRFMTKESTAVDNKAECSSSFSRSFRVPIPPPWHSVQLTLSKECDGV
ESNGACTEKNMAHTDSSSIFDDANCETAVVGVHDQKLFNGIVARTSSSLFEFLNEINLGH
LPLFPHGRDKKARILEYLNNKSTLDQCKSSIDRISYSSKSCFLRVILRAYKKGAFEEGAV
ICAPKSADLSLWTSRSADDEKALRIPESAVRHYFKLREQSPTMWELQLPENDAAGESHRW
PIGFVTTGFVHGSKKPVAEGLCEATLLARLREQQFDGMFSKKKEQIYVLVRNLRSSAYRV
ALATVILEQKENDLESM
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggggagaaagtcgtcactgctagcggtaaggacaggtcaattcccagaaatctcaat
gtgcataagtttgtagaccctcgggcgtctgagctggaagctcttcaatccatcattttg
aatcggatgaatagtaatacttgtgatcaaaggtcgaagaggagaagaacttcttcttat
ttaactaatgcttctaggaaaaggaaaaataagaaaatgaaaatggataccacccatctg
gatttagcgaaaaacgagaagaaggcttctcggaaaatacgtcgcagagctgagcttaaa
atgaatcatggaattggattttctacttctggggatggcaccaaaaggcttagaacacat
gtttggcatgctaagcgtttcactatgactaagctttggggttttcatctccctctaggg
ttgcagggcagaggtaagggttctagagctcttctgaaatggtacaatgatggagtgctt
atacatgatgctagttattacgttcccgtccagttggagggtccagaggactctctgatc
tcagctctaggaatggtgttggaaccatccatagtatctcattctcaagacatttctcat
gcaattatttctggtgttatttatggtagagcaattcttcatgatatcagggtcccgggt
gctactgcaattgctcctgtaacatatatgtggcgtccatgtccttatcgaaaaaaagaa
atcaatgttaataatcataattgcagtgtatttaagacaatggatggcatagacgcgtct
tctacttcacgccagctttgggtttggttacatccttctgcctcttgtgaaggatatgat
gctctaaaattcgcttgccaaaaggagatggatgagaaaaatatcccaatttactgttct
tcattagaagggcaacttgcaaaattggaagtatttggctcaaatgcatcccagcttctt
gaaaatcttttgcatcctatgacacgtgcttcacagaatctttggcagttgaaaaagcat
tccactgggggtcctgatggtaattctcatttgaagacattgttcaattgcgaaaacgag
aattacattccatcatatggaattgcatccatcgctttcaaagatcctcgaatgctaccg
aatgaaaagactacagacgttcaagattcaacttcaatgcataaccctgctgattcctca
gcaattctttctgaagataaagaaattccaaaaagtaatgaaatgttatcatctttggat
tcaagaattgacgaaaatggttttttacttgagaacaaggaattgtgggatgccaaaagt
ggaatgagggcccctgttgaagatactgttatttgtgcagcaagacatcatacacggatg
aatcgcttttgccttgatgaaccgtctgcagagatggcgaaagatctgagctcattgcaa
tgctcaagtgcttgtcccacattgcttttaaatgagaatgacgaaagcagtactctttta
agatggtcaatcatattacccgtaagttgggttaaggcattttggattcctctaatatct
aagggggctcgggcaatcggtttgagagagagacactggattgcgtgtgaagtgggattg
ccatcgtttccttgggatttccctgattgtactgcgtactcacgattcatgacaaaagaa
tctaccgcagttgacaacaaagctgagtgttcttcttccttttcaagatcttttagggtt
cccattccacccccatggcatagtgtccagttgacacttagcaaggaatgtgatggagtg
gagagcaatggagcttgtactgagaaaaatatggctcacaccgattcatcatcgatattt
gatgatgcaaattgtgaaactgcagtggttggtgttcacgatcagaaattgttcaacgga
atcgtggctcgaacatcttcttcattgtttgaatttttgaatgaaataaaccttgggcat
ttgcctctgtttcctcatggacgagataaaaaggctagaattctcgagtatcttaacaac
aaaagcacactagatcagtgcaaaagtagtatcgaccgaataagttatagcagcaaatca
tgtttccttagagtgattctccgcgcttataagaaaggtgcgtttgaagagggagctgtt
atttgtgctcccaagtcagctgatctatctttgtggacttcaagatcagcagacgacgaa
aaagcactccgaattcccgaatctgctgtaaggcactacttcaaactcagagaacagtcg
cccacaatgtgggaactacaattaccagaaaatgatgctgctggagaatctcacaggtgg
cccatcggcttcgtcaccactggattcgttcacggaagcaagaagccggttgcagagggt
ctttgtgaagcaacgttactagctcgtcttcgagagcaacagttcgacggtatgttttca
aaaaagaaagaacaaatttacgtccttgttaggaacttaagatcttcagcataccgagtt
gcacttgctactgttatccttgagcagaaggaaaatgatttagaatctatgtaa
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