KEGG   Cucurbita moschata (crookneck pumpkin): 111437876
Entry
111437876         CDS       T05248                                 
Name
(RefSeq) flap endonuclease 1 isoform X1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030  DNA replication
cmos03410  Base excision repair
cmos03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111437876
   03410 Base excision repair
    111437876
   03450 Non-homologous end-joining
    111437876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmos03032]
    111437876
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111437876
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111437876
DNA replication proteins [BR:cmos03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    111437876
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     111437876
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     111437876
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   111437876
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 PM2_P3 HHH_2
Other DBs
NCBI-GeneID: 111437876
NCBI-ProteinID: XP_022931724
UniProt: A0A6J1EV18
LinkDB
Position
Unknown
AA seq 417 aa
MGIKGLTKLLADNAPKGMKEQKFESYFGRKIAIDASMSIYQFLIVVGRSGTEMLTNEAGE
VTSHLQGMFNRTIRLLEAGVKPVYVFDGKPPDLKKQELAKRYSKRADATADLADAIEVGN
KEDIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVIEAPSEAEAQCAALCKLGKVYAVASED
MDSLTFGSPRFLRHLMDPSSRKIPVMEFEVAKILEELNLTMDQFVDLCILSGCDYCDSIR
GIGGQTALKLIRQHGSIENILENINKERYQIPEGWPFQEARQLFKEPLVCTDEEQLDIKW
TTPDEEGLISFLVNENGFNSDRVTKAVEKIKAAKNKSSQGRMESFFKPVTNPSVSTKRKV
TKCVLKSPKPGIQHKYSPQAFYPSRTKVIGSLGTPILDHSSKYSGSRPLVMAACFGT
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgggcattaagggtttaaccaagcttttagctgacaatgcccccaaaggcatgaaggag
cagaagttcgaaagctattttggacgaaaaattgcaattgatgccagcatgagtatctat
caatttcttattgtcgtgggaagaagtgggactgagatgttgaccaacgaagctggtgaa
gtcactagccatttgcaagggatgtttaaccggacaataaggcttctcgaagctggagtt
aagccagtctatgtgtttgatggaaagcctcctgatttgaaaaagcaagaacttgcaaaa
cgttattcaaagagagcagatgctactgcagacctggcagatgcaattgaggttggaaac
aaggaggacattgagaaattcagtaaaaggacggtcaaggttacaaagcagcacaatgat
gactgtaaaagacttttgagactcatgggagtgcctgtgatcgaggctccctccgaagct
gaggcacaatgtgctgcgctttgcaagttaggaaaggtttatgctgtggcatcagaagac
atggattcactaacatttggatctcctagatttcttcgtcatttaatggatcccagctca
aggaagatcccagttatggaatttgaagttgcaaagattttggaggagctgaaccttacc
atggatcaatttgtcgatttgtgcattctttctggatgtgattattgtgacagtattcga
ggtatagggggacagactgctttaaagcttatccgtcaacatgggtctatagaaaatata
ctagagaacatcaataaagaaaggtaccaaattccagagggttggccatttcaagaggcc
cgacagctttttaaagaaccactagtgtgtactgacgaagagcaacttgacattaagtgg
actactccagatgaagaaggcttaatctcatttttggtgaatgagaatgggttcaatagc
gatagagtaacaaaggcagtagaaaaaattaaagcagccaagaacaagtcatcacagggc
cggatggagtcatttttcaagcccgtaacgaatccttcagtatccactaaaagaaaggta
accaaatgtgtacttaagtctcctaaaccaggaatccagcataaatactctccacaagct
ttttatccgtcaaggacaaaggtcattggcagcctagggacgccaatattagaccattct
tccaagtactcagggtcaaggccattagtcatggctgcttgcttcggcacatga

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