Cucurbita moschata (crookneck pumpkin): 111438488
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Entry
111438488 CDS
T05248
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03030
DNA replication
cmos03410
Base excision repair
cmos03420
Nucleotide excision repair
cmos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111438488
03410 Base excision repair
111438488
03420 Nucleotide excision repair
111438488
03440 Homologous recombination
111438488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111438488
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111438488
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111438488
DNA replication proteins [BR:
cmos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
111438488
DNA repair and recombination proteins [BR:
cmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
111438488
NER (nucleotide excision repair)
GGR (global genome repair) factors
111438488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
111438488
NCBI-ProteinID:
XP_022932172
UniProt:
A0A6J1EVX1
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MITLGASTSQASSLITQWPSYFFLWRSNSVSNSSISICASSKRLYRAEFSSLKSVRSASP
NVNMFHASLQCRQSSFLCTNSFFETRQHDKERAFLSDINDWSKSTRQLKQEKLFRFSETE
ILTKNDEEKLRKKENLIGYGTLHCYNSLCPPYSKVQTNLGSNCSNASNDPNCINPPTNVL
SDEFGKQEPINFERTENVATIDRMISDRVPLLETVKFSRGECNGDTNSYSGERPMSKPAN
NVLHSQVVPMQSNKKYSVSQNGKGSIMRHVPNVSPKGRNRNISLGKVNSVLKTSKCTEAA
NGINKGVAGEEFSKVIVNGSGTKMMEVLATAHKPDIKERLNGVYESVLVVDGVSAAKEVV
SIKERLNSVYESVLVVDGVSAAKEVVSMLTTKYKNLVHACDTEVAKIDVKQETPVDHGEI
ICFSIYSGPKADFGNGKSCIWVDVLDGGGKEILLQFAPFFEDPLIRKVWHNYSFDNHIIE
NYGIKISGFHADTMHMARLWDSSRRMNGGYSLEALSCDTKVMSGAKLDQEKELIGKVSMK
TIFGRKKMKKDGSEGKLIVIPPVEELQREERKPWVSYSALDSICTLKLYESLKKKLSDMP
WERDGERIPDKTMFNFYEDYWKPFGEVLVRMETEGMLVDRPYLAEIEKLAKAEHEVAANR
FRNWASEYCPDAKYMNVGSDAQVRQLLFGGTCNSKNPEESLPTERTFKIPNSEKVTEEGK
KTPSKFRNITLRRFSDEALSTELYTATGWPSVSGDALKILAGKVSAEFDDFTDDPQSDTE
VVNDFETMPHEENRRRIVHECANMSDYGTALKAFKLKEEGMEACHAIAALCEICSIDSLI
SNFILPLQGSNISGKNGRVHCSLNINTETGRLSARRPSLQNQPALEKDRYKIRQAFIASP
GNSLIVADYGQLELRILAHLANCQSMLDAFKAGGDFHSRTAMNMYPHIRKAVEEGSVLLE
WDPQPGEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPIGLSKDWKVTVEEASKTVDLW
YNERTEVRRWQELRREETEKKSCVRTLLGRARQFPSMKQVTRAQKGHIERAAINTPVQGS
AADVAMCAMLEISKNSRLRELGWRLLLQVHDEVILEGPTESAEVAKAIVVDCMSKPFNGK
NILKVDLAVDAKCAQNWYSAK
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgatcactttgggggcctccacttcccaagcctcttcgttgattactcaatggccctcc
tatttctttctatggcggtctaactctgtttctaattcttctatttccatttgcgcctcc
tccaagaggctctacagggctgaatttagttctctgaagagtgttcgcagcgcttctcca
aatgtgaatatgtttcatgcttccttgcagtgtcgacaaagttctttcttgtgcaccaat
tcattttttgaaactagacaacatgacaaggagagggcgtttctgtctgacataaatgat
tggtctaagagtactaggcaactgaaacaagagaagctctttaggttttcagaaaccgag
atcctgacaaagaatgacgaagaaaagctaagaaaaaaagaaaatctcattggctatggg
actttgcattgttacaacagtctttgccctccatattctaaggttcagacaaatttggga
agcaactgttccaatgcttctaatgatcctaattgtataaaccctccaactaatgtgtta
tcggatgaattcgggaaacaagaacctataaattttgaacgaactgaaaatgttgcaact
atagataggatgataagtgacagggtacctttacttgagactgtcaagttttcacgtggt
gaatgcaatggagacactaattcgtattctggggaacggcccatgagcaagcctgcaaat
aatgttttgcatagtcaggttgttcctatgcaaagtaacaaaaagtattctgtttctcaa
aatggaaaggggtcaattatgcgtcacgtaccaaatgtttcacctaaaggcagaaataga
aatatctctttgggaaaggtgaatagtgtactaaaaacttcgaaatgtactgaagctgct
aatggaataaataagggtgtagctggggaagaattttctaaagtgatcgtcaatggaagt
ggcaccaagatgatggaagtacttgcaactgctcataagccagatataaaggagaggctt
aatggtgtatatgaaagcgttcttgttgttgatggtgtatctgcagcaaaggaagttgtt
tcaataaaggagaggcttaatagtgtatatgaaagcgttcttgttgttgatggtgtatct
gcagcaaaggaagttgtttcaatgcttactaccaagtacaagaatctggtgcatgcttgc
gatactgaggtggccaagattgatgtgaagcaagaaacacccgttgaccatggtgaaata
atatgcttcagtatttattcaggaccgaaagcagattttggaaatggaaagtcttgcatc
tgggtggatgttcttgatggtggcggtaaggaaattttgcttcaatttgcaccattcttc
gaagatcctttgatcagaaaggtctggcacaactacagctttgacaatcacattattgaa
aactatgggattaagatttctggcttccatgctgacacgatgcacatggcacggttatgg
gattcatcaaggagaatgaatggtggatattcacttgaagctctttcttgtgatacaaag
gtcatgtctggggctaaattggaccaggaaaaagagttgataggtaaagtgtccatgaaa
actatctttggccggaagaagatgaaaaaggatggatctgaaggcaaacttatagtcatt
ccccctgttgaagaacttcaacgagaagaacggaaaccatgggtatcttattctgcatta
gattcaatatgcacgctgaagctttatgagagcttgaagaaaaaactgtctgacatgcct
tgggagagggatggagaaaggattccggataaaacaatgttcaacttttatgaagattat
tggaaaccatttggtgaagttcttgtcagaatggaaactgagggaatgctagttgatagg
ccatatcttgctgagatagaaaaattggccaaagcagaacacgaggttgctgctaacaga
tttcgtaactgggcttcagagtactgccctgatgccaagtacatgaatgttggaagtgat
gcacaagtgcgccaattgctctttggtggcacttgtaacagtaagaaccctgaagagtct
cttccaactgaaaggacattcaaaattccgaacagtgaaaaagtcactgaagaagggaag
aaaactcccagcaagtttcggaatattactttacgtcgcttcagtgatgaggctctctca
acagaattgtacacagcaactggttggccttcagtgagtggggatgctctgaagatctta
gcaggcaaggtctctgcagaatttgatgacttcaccgacgaccctcagtctgacactgag
gttgtcaacgattttgagacaatgcctcatgaagaaaacagaaggcgtatagttcatgaa
tgtgcaaatatgtctgattatggaactgctttaaaagcatttaaattgaaggaggagggc
atggaagcctgtcatgctattgctgctttatgcgaaatctgctctattgactcgttgata
tcaaatttcatccttcccttacagggaagcaatatatctggtaagaatgggcgtgtccat
tgttctctaaacatcaacacagaaactggccgcctctccgctcggagaccaagtttgcag
aatcaaccggctctggaaaaggaccgatataagatccgtcaggcctttatagcttctcct
ggaaattccctcattgttgctgattatggccagctggaacttaggattcttgctcatctt
gccaattgtcagagcatgctggacgcctttaaagctgggggagatttccattcaagaact
gcaatgaatatgtaccctcatattcgtaaagctgtggaagaaggaagcgtgcttcttgag
tgggatcctcaacctggggaagataaacctccagttccattgttgaaggatgcctttgct
tctgaaagaaggaaagctaaaatgcttaatttttccattgcatatggcaagactcctatt
ggcctttccaaagattggaaggttactgtggaggaagcaagtaagacggttgacttgtgg
tataatgaaagaacagaggttcgtagatggcaagaactacgaagggaagagactgagaag
aaatcatgtgttcgcacattgcttggacgagctcgtcagtttccttcaatgaagcaagtt
actcgtgcccaaaaagggcatatagaaagagctgctattaacacgcctgtgcagggtagt
gctgccgatgttgccatgtgtgccatgctggaaatatctaaaaattcacgtttgagggaa
cttggatggaggctgcttttgcaggttcatgatgaagtgatcttggaaggaccaactgag
tcagctgaggttgctaaggccattgttgttgattgcatgtcgaaacccttcaatggaaag
aatattcttaaagtcgaccttgctgtggatgccaagtgtgcacaaaactggtattctgct
aaatag
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integrated database retrieval system
