Cucurbita moschata (crookneck pumpkin): 111438656
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Entry
111438656 CDS
T05248
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0-like
KO
K14411
RNA-binding protein Musashi
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111438656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111438656
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111438656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
111438656
NCBI-ProteinID:
XP_022932294
UniProt:
A0A6J1EWL0
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MKPLKPFPARRREREREREREKGERVGARERERERERPALGFSGNPRNFDNKGASARDLG
RVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREY
MSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEE
MRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKIHRGIGFITFASS
DSVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYIS
AATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDV
YVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDEAGAGAAGAS
GSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRPY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctttaaagccctttccggcccgtcgtagggagagagaaagagagagagagaga
gagaagggagagagagtgggagcgagagagagagagagagagagagagagacctgcgtta
gggttttctggaaatcccagaaattttgataataagggagcgagtgcgagagatttgggg
agagtgagcgtgggtcttagagcgagcgagcgagcgagcgaggaagaggaggaggagaga
gatatactttcacttttaggattcgatttctctgcgtttactgcaccattcatcatggat
cggaagctagtggttcttggtattccatgggacgtcgatacagaggcgctgagagaatac
atgagcaaatttggggagttggaggattgtatcgtcatgaaggagaggtcaactggtcgt
tctcgtgggtttggatatgtgacatttgcaactgacgaagatgctaagaatgcactgtca
agtgaacactttcttggcaacagaatgatggaagtcaaaattgccacacctaaggaggag
atgagagcacctccaaagagagtcactagaatctttgtagcaaggatctcacaatctgtg
actgaggctgccttccgcagtcattttgagaaatacggagagataacagatctttacatg
ccaaaggaccagggatccaaaatccatcgtggaataggtttcatcacctttgcaagttca
gattctgtggaaagtttgatggctgaaactcatgaattaggaggttctactgtggttgtt
gatagagcaacccccaaggatgatgatttcaggcctattgggaaaatgccgcaagggggt
gggggtgggggtgggggtggtggtgggggtggatatggcgcatacagtgcttatatttct
gcagcaacaagatatgcagcacttggtgctcctaccttatacgaccatccaggcccagtt
tatgggagaagggaatttcgagggatgggaaaaaagatttttgttggtaggctcccacaa
gaagcatctgctgatgatctccgccagtactttggtagatttggccgtatattggatgtc
tatgttcccaaggatcctaaaagatctggtcatcgaggttttggttttgtaacttttgct
gaagatggtgtagcggatcgtgtatctcgaagatctcatgagatttgtggacaacaggtt
gctatcgattcagccactcctcttgatgatgaagctggagctggagcagctggagcaagt
ggaagttttatgatgaacagcgccgcagaatcgttcggtggctatgcgggacctatgagg
acttatggaaggatgtatggaagcctggatttcgatgattggggttatggaattggtgga
ggaaggccatctagaggagactggaggtatcggccatactga
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