Cucurbita moschata (crookneck pumpkin): 111439108
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Entry
111439108 CDS
T05248
Name
(RefSeq) RNA pseudouridine synthase 7-like isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111439108
Enzymes [BR:
cmos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
111439108
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111439108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
111439108
NCBI-ProteinID:
XP_022932600
UniProt:
A0A6J1F2L9
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MTSKRKRGEEGMGEGEIVWQTPANAPQRCDYIFHNGRRHVRPYYFEFIAHVKNRWAGKSI
VDLFTEEFKGRPYEYYIDAVKCGRIQVDGEMVPTSYIVKTSQKISHFLHRHEPPVMALEV
KILKEEADVLTVYKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLII
ARNASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDVHINYNAREGRSTTEMVDSCK
DTMAKGKAAQTKFTCIGSDGVHSIVLCEPVTGRTHQIRVHLQYTGYPIANDALYLTKVAS
GRSVEKTTADRAAAISACSTAHDIEEDCVSARKENSSEDFSIDPMCTNCPNLAPKGYDGE
EEGLWLHCVRYSGPGWIYECPYPEWASLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaaaggaagaggggagaagagggcatgggagaaggagagatcgtatggcaa
accccagccaatgcccctcaacgatgcgattacatatttcacaatgggaggcggcacgtt
agaccttactacttcgagttcattgcccatgttaagaatcgatgggccggcaaatccatt
gtcgacttgtttactgaagagtttaaaggccgaccatacgagtactatattgatgcagtc
aaatgtggtcgcatacaagtcgatggggagatggtgcctacatcatatatagttaaaaca
tctcaaaagataagccatttcctgcacaggcatgaaccgcctgtaatggctttggaggtg
aaaattctcaaagaagaagcagatgtgctgacggtttacaagcctgcgtctgttccagtt
catccatgtggtcaatataggaagaacaccgttgttggcatacttcaggcagagcatggt
ttggcacctctatttcctatacatcgactagaccgtcttgtctcaggacttcttatcatt
gctagaaatgcatcgaaagctgatcttttcagacaacagattgagtctgggctggtgaag
aaacagtacattgcaagggtggtgggtgtgtttccagaagaagagcaagtggtcgatgtt
cacataaactacaatgctcgagagggaaggagcacaacggagatggttgattcttgcaag
gatactatggcaaaggggaaggccgctcaaacaaagtttacttgcatcggttccgatgga
gtccatagcattgttttatgtgaaccggtcactggacgaactcatcaaatccgtgtgcat
ttgcagtacacagggtatcctattgccaacgatgcactctaccttacaaaagtagcttct
ggtcgctccgtggaaaaaacaactgcggatagagctgctgcgatatctgcgtgttctaca
gcacatgatattgaagaagattgtgttagtgcacgcaaagaaaactcaagtgaagatttt
agcattgaccccatgtgcacaaactgtccaaatctggctccaaaaggatatgacggagaa
gaagagggattgtggctgcattgcgttcggtactccggaccaggatggatctacgaatgc
ccatatccagaatgggcttcacttaaatag
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