Cucurbita moschata (crookneck pumpkin): 111439145
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Entry
111439145 CDS
T05248
Name
(RefSeq) two-component response regulator ARR12-like isoform X1
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111439145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111439145
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
111439145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
KaiA_N
Motif
Other DBs
NCBI-GeneID:
111439145
NCBI-ProteinID:
XP_022932667
UniProt:
A0A6J1EXE4
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MTVEAHSVTSVGDDGATDRFPVGMRVLAVDDDPICLKVLETLLRRCQYHVTTTKQSIEAL
KMLRENRNNFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGISHGAC
DYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSEDKARNGGSEGEQGFSSTSNADNAK
FNRKRKDQDDDDDEDGKDNGLDNDDPSNQKKPRVVWSVELHKKFVSAVNQLGLEKAVPKK
ILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGAFMGMGSLDGYG
DLHGFAGMGRLQNSSLSSYSPVGMLGRLNSPAGMSLRGITSSGLIQQNSKNLNSAISNLG
KLQPTTMLPPNQPTNLLQGIPTSLELSQLQHSKSTIPIGDFNIINETSGFGVPNSFPDSR
VNIGNSTNLVSTAPLMLQGTMPTYGNQTSLRVDPLNGETFDVDIGGSNFLDPDPSNGTWQ
GAAQLSRFSATSLNQNQAYPNDQFNAINSSISSTPSTFGNVSVDFSSRNAVAAPLQDSRD
MQCQAGVVGSVIQTINTMPKQSWEELKHDYSRNVQHNLGAINSLVSGNETLNPLSQSFNQ
NNLIYDRKVSSSLMVPSNAAPLSFAQHNMVEKLGPNTKTNVDGNYLLNQTKSHDGSTQGS
SESLDYIMNAMIKREQNEIPEVNGEFGFDNFSLGSCI
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaggctcattcggttacttctgtcggtgatgatggtgccactgatcgtttt
cctgttgggatgcgtgttcttgctgttgacgacgaccctatttgtctcaaagtgcttgaa
actctcctccgtagatgccaataccatgttaccacgacgaagcagtccattgaggctttg
aaaatgttgagagaaaatagaaacaattttgacttggttatcagtgatgtgaacatgcct
gatatggatggtttcaagcttcttgagttggtggggcttgagatggacctacctgtgatc
atgttatcagcacatagtgatactgagcttgttatgaaggggatttcgcatggggcatgt
gattatctgttgaaaccggttcgaatcgaggagttgaagaacatttggcagcatgtgatt
cggaggaagaagctcgaaccgaaggcaaagaacaagttccctagtgaagataaggctcga
aatggaggcagtgaaggtgaacaaggtttctcatcaaccagtaatgcagacaatgcgaaa
ttcaataggaagcggaaggaccaagacgacgatgacgatgaagatggaaaggataacggg
cttgataatgacgacccctcgaaccagaagaagcctagagtagtgtggtcggttgagttg
cacaagaaattcgtctcagcggttaatcagttgggtctcgaaaaggctgtgcctaagaaa
atcctggatctgatgaatgttgaaggacttaccagagaaaacgtagcaagtcatttgcag
aaatataggctttacctgaaaagaatcagcaatgtggcatcccagcaagctaacatggtt
gctacatttgggagtaaagacggtgcgttcatggggatgggttcactcgatggatatgga
gatttacatggctttgcaggaatgggacggcttcaaaactcttcgttatcatcttattca
cctgttggaatgcttggaagattgaactccccggctggaatgagtctgcgtggaatcacc
tcttctggactgatacagcaaaactccaaaaatttgaactccgccattagtaaccttggg
aagctccagccaactactatgctgcctcctaaccaacctactaatctgttgcaaggaatt
ccgacgtcgctcgagctcagccagctgcaacacagcaagtccaccattcctattggagac
ttcaatataataaatgagacatctgggtttggagttcccaacagtttccctgatagtaga
gtgaatattggaaactcaaccaatttggtttcgactgccccgttgatgttacaaggaacc
atgccaacatatggaaaccagacttcccttagagtagatccgctgaatggagaaactttt
gacgtagacattggtggttcaaattttttggatcctgatccttctaatggaacctggcag
ggagcagcacaattgtctagattctcagccacttctttgaatcaaaatcaagcctatcct
aatgatcaattcaatgcaataaactcgagcatttcttcgaccccctcaacgtttgggaat
gtctcggtcgatttttcctcgagaaatgcagttgcagctcccttgcaggattcaagagat
atgcagtgtcaagcaggggtagttggcagtgttattcaaactataaataccatgccgaag
cagagttgggaagagcttaaacacgattacagtcgaaatgtgcagcataatcttggtgca
atcaattctctggtttctgggaatgagactctaaaccccttaagccagagtttcaatcag
aataatctaatatatgatagaaaggtcagttcatctttgatggttccatcaaatgctgct
ccactgtccttcgctcaacataacatggtcgaaaaattgggtcctaacacgaagacgaat
gtggatggcaactatctgttgaaccaaacaaagtcacacgatgggtcgactcagggcagt
tccgagtccttggattatataatgaacgcgatgatcaaacgggaacaaaatgaaatacca
gaagtgaatggagagtttggatttgataatttctctctaggatcgtgtatttga
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