Cucurbita moschata (crookneck pumpkin): 111439459
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Entry
111439459 CDS
T05248
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111439459
04120 Ubiquitin mediated proteolysis
111439459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111439459
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111439459
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
U-box type E3
111439459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
111439459
NCBI-ProteinID:
XP_022932900
UniProt:
A0A6J1F3F7
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MATSKSQRSPEEVEDIILRKVFLVSLTPPSDSDSRTVYLEQTAAELLSEGKQLRISRDVM
ERIIIDRLSSNFPSAEPIFQYLIGCYRRAHDETKKIASMKDRNLRSEIEMALKQAKKLTV
SYCRIHLGNPELFSGGDLGSNSTTSPLLPLIFSEVGSSMDGFGASTSVGGAYQCPPGFMD
EFFRDSDFDTLDPILRGLYEDLRGTVLKVSALGNFQQPLRALRFLVSFPIGAKSLVNHPW
WIPPGKYSNGRVIERTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPSDLLSSF
TTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGM
FVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTDWINNGT
QLKTDNSGQFSDSESRLLQSQEASSSGSNATIESSTAKARSNSVKTRYPFICECFFMTAR
VLNLGLLKAFSDFKHLVQDISRCEDTLATLKAMQGQGPAPQLEMDVARLEKEIELYSQEK
LCFEAQILRDGSLIQQALTFYRLMVVWLVGLIGGFKMPLPSSCPMEFASMPEHFVEDAME
LLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVT
ATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNA
WRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWEQRPAQERQ
ERTRLFHSQENIIRIDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVG
PQRRSLSLKDPEKYEFRPKELLKQIVHIYVHLARGDKENIFPAAISKDGRSYNEQLFNAA
AVVLRRIGEDGRIIQEFIALGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVIL
PSSRITVDRPVIQRHLLSDSTDPFNRSHLTSDMLIPNEELKARIKEFIMSKKLKRQPDGG
VAMQSSKATIQPTSGEMLID
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccaaatcccaaaggtctcctgaggaggtggaagacattatccttcgcaaa
gttttccttgtctctctcacccctccttccgattccgattctcgcaccgtctatctcgag
caaaccgccgccgagctccttagcgaaggcaagcaattgaggatttcaagggatgtaatg
gagcgtatcataattgatcgtctatcgagtaatttcccctctgccgaacctatttttcag
tacctaatcggctgctaccgtcgggctcacgacgagactaagaaaattgcctccatgaag
gataggaatttacggtctgagattgagatggcgctcaaacaagccaagaagttgacggtt
tcctattgtaggattcatttggggaatcctgaattgttttcgggtggggatttgggtagt
aactccactacttcgcctttgcttcctttgattttctctgaagttggtagctccatggat
ggatttggggctagtaccagtgttggtggagcctatcagtgccctccgggtttcatggac
gagtttttccgggattcggattttgatacattagaccccatattgagggggttgtacgag
gatttgaggggtaccgtccttaaagtttcggctcttgggaacttccagcagcccttaagg
gcacttaggtttcttgttagttttcccattggggctaaatctttggttaatcatccatgg
tggattccccctggtaaatattccaatggccgtgtcattgagaggacaagtattttgggg
cctttcttccatgtcagtgctctgcccgaccatgccatttttaagagccaacctgatgtt
gggcagcaatgcttttcagaagcatcaactcgtagaccatctgatttactctcttcattc
actacaattaaaacagtcatgaataacttatatgatggtcttgcggaagttcttctctct
cttcttaagaacacagagacccgtgagaatgttcttgagtatcttgcagaggtgataaat
agaaactcatcaagggctcatatacaggttgatcctctctcctgtgcaagttcaggcatg
tttgttaatctcagtgccatcatgctacgtctttgtgagccatttctagatgcaaacttg
accaaaagggataaaattgatccgaaatatgtatgttatggtaaccgcttggagttaaga
ggattaactgctctacatgcatcgtctgaagaagttacagactggattaataatggtact
cagttgaaaactgataactccgggcagttcagtgacagtgaaagtcgcttgctgcaatcc
caagaagcttctagttctggcagtaatgctacaattgaatcttctactgcaaaggcaaga
tcgaatagtgtgaagactaggtaccctttcatatgtgagtgcttctttatgactgcaagg
gtgctgaatttgggcttgttaaaagcattttcggacttcaagcatttagtacaggatata
tctaggtgtgaagatacattggccacactcaaagccatgcaaggacaagggcctgctcca
cagcttgaaatggatgtagctcgccttgagaaggaaatagagttgtactcacaggaaaag
ctttgttttgaagctcaaatactgagggacgggagtctaatccagcaagctcttactttc
tatcgattaatggttgtatggttagttggtttgattggtggatttaaaatgcctcttcca
tcaagttgcccgatggaatttgcatccatgccagagcattttgtggaagatgcaatggaa
ttgcttatatttgcttcccgaattccaaaagctttggacggtatcaatttggatgatttt
atgaacttcatcattatgtttatggcaagtccggaatatattagaaatccttacttaaga
gcaaagatggttgaagttctcaactgctggattcctcgtagaagtggttcatctgtaaca
gcaacattatttgaaggccaccaactatcactcgagtatcttgtcaggaatctcttaaag
ctttatgtggacattgagttcactggttcacatacacagttttatgacaagttcaacatc
cgtcataatattgccgaacttctcgaatacctttggcaggttcctagtcatcgtaatgct
tggagaatgattgccaaggaagaggagaagggtgtttacttgaatttcttgaacttccta
atcaatgatagcatatatcttcttgatgaaagccttaataaaattctcgaacttaaagag
cttgaagctgaaatgtcaaatactgcagaatgggagcaacgacctgctcaagagaggcag
gagagaactaggctatttcactcccaagaaaatatcatccggattgacatgaaattagca
aatgaggatgtgagtatgctggcatttacaacagagcaaatcacagctccttttctactt
ccagagatggtcgaacgggtagccagcatgcttaattatttcctcctgcaacttgttggt
cctcagcgaagatctcttagtctgaaagaccctgaaaagtacgaattccgtccaaaagag
ttgcttaagcagattgttcacatatatgttcatctggcgagaggcgataaggagaatatt
ttcccagctgccatttcgaaggacggaagatcgtataacgagcagttgttcaatgctgca
gcagttgtacttagacgaattggagaagatggtaggataatacaggaatttattgctctt
ggtaacaaggcgaaggatgcagcttcagaggccatggatgctgaggctactctaggagat
ataccggatgaattccttgacccgatccaatatactttaatgaaggatcctgtgatctta
ccttcttcaaggatcacggtcgacagacccgtcattcaaagacatctccttagcgatagc
accgacccgttcaaccgatctcatctgacttcggacatgctaataccaaacgaagaactg
aaagcaaggatcaaagagttcatcatgtcaaaaaaattgaagaggcaaccggacggaggg
gttgcgatgcagagcagcaaggcgacgatccaacccacaagcggagaaatgttgattgat
taa
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integrated database retrieval system
