Cucurbita moschata (crookneck pumpkin): 111439547
Help
Entry
111439547 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111439547
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111439547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
111439547
NCBI-ProteinID:
XP_022932930
UniProt:
A0A6J1F3I5
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MALYGTLMLILSFLLLLLLNHVLADGLTFDIVSLGAKPDGKTDASSVLQTAWVKACDSTG
PATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSEIQVLAKTKAWIGFKDVNGLS
IHGGVIDGKGSGIWNCKHSGNNCPDGARNLEIINAQNVIINGLASINSQIFNIVVHGCRN
VNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGP
GHGISIGSLGRSSDEPGVKNVTVTSSTFTGSTNGVRIKSWARPSNGFATDIHFQHITLDN
VKNPIIIDQNYCPHDKGCPHQDSGVKISEVTYEDIKGTSATEIGVKFDCNPTNPCTGLTL
EDIKVTYNDQIAKASCESAKGTASGVVEPASCLD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctctctatggaaccttaatgctcatactttcctttttgctacttctgcttttgaac
catgtcttggctgatggattaacctttgatattgttagtcttggagccaagcccgatgga
aagaccgatgcctcgtctgtgcttcaaacagcatgggtcaaggcttgtgactcgacggga
ccagctactattcacgtgcccataggcacattctacgttcaaagtgggagctttaatggg
ccttgtaagaacaatgctattactattcgcatcgatggcactcttgtggcttcctcggaa
attcaagttctagctaaaactaaagcttggattgggtttaaagacgtaaatgggctttcc
attcatggcggtgttattgatgggaaaggatctggcatatggaattgtaaacactctggg
aataattgtcccgatggagcacggaatcttgaaatcataaatgcacaaaatgttatcatc
aatggattagcttcaattaatagccaaatatttaacattgtggtgcacggttgccgaaat
gtgaacattcaaggagtgaaggtctcggatcctggcgatagtccaaacactgatggcatc
catgtgcaagagtcatcagatgtgaccatccttagttctaacattggtaccggtgacgac
tgcatctcaattggtccaggaaccaccaacttatggatagaaagtgttacatgtggacct
gggcatggaatcagcattgggagcttggggaggtcgtcggatgagcctggagtgaaaaat
gtgacagttacatcatcgacttttaccgggagtacgaatggagtgaggattaagtcttgg
gcaagaccaagcaatgggttcgctacggatattcattttcaacacattactttggataat
gtgaagaaccctatcataattgatcaaaattactgtccacatgacaaaggctgcccccat
caggattcgggagtaaaaattagcgaagtaacttacgaagatatcaagggaacatcagcc
actgaaataggagtcaaatttgattgtaacccaacaaatccttgcaccggactcaccttg
gaagacattaaagtgacttataatgatcaaatcgctaaagcttcatgcgaaagtgccaaa
ggaactgcttcaggtgtggttgaacctgctagttgcttagactag
DBGET
integrated database retrieval system