Cucurbita moschata (crookneck pumpkin): 111439599
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Entry
111439599 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111439599
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111439599
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
RNase_J_b_CASP
ET
Motif
Other DBs
NCBI-GeneID:
111439599
NCBI-ProteinID:
XP_022932976
UniProt:
A0A6J1EXV2
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All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAIPLIEEATTEETVPEEIKEVLDSYTDIMPESLPQTLPPRRGIDHEIELLPGVKPPAKN
AYRMAPPELAELRKQLDELLKAGFIRPAKAPYGAPFSFALLLTFHVFLSLLFLFCNHALA
AELTFNIISLGVKPDGKTDASSVLQMTWAKACDSSTPATIYVPKGIFYVRSVSFNGPCKN
NVITVLIDGTLVASSDIQVLAKTKSWIEFSHIDGLSITGGIIDGQGTALWNCKHSGKSCL
TGATSLRINDAQNVNINGLSSINSQKFNIVVSGCQNEHMTRVNVSAAGDSPNTDGIHVEQ
SSDVTILNSSISNGDDCISISLGTSNLWVESITCGPGHGINIGSLGIKAEEDGVHNVTVT
LSTFIGLKNGVRIKSWGRPSRGFATKVYFQHIIMDNVKDPIIIDQNYCPHEEDCPGQASG
VKVSEVTYEDIKGTSATEIAINFDCSPINHCTGLSLKDIHLTYENHIAKASCKNAEGTTS
GVVEPSGCLADESNFSLNVLVLKLKDSKNALEGL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggccataccactgatagaagaagcaaccaccgaagagactgtcccagaggaaatcaag
gaagtactagacagctataccgacataatgccagagagtctaccacaaacactaccacct
cgtcgaggcattgaccatgaaatcgaactcctccccggggttaagccgccagcgaaaaac
gcataccggatggctccgcccgagctagccgaattgaggaaacaactggacgagttgctg
aaggcgggattcattcgcccggcaaaggcaccttatggagcccccttttctttcgctctt
ctcctaacctttcatgtttttctttcccttctatttctattttgtaaccatgccttggct
gctgaattaacattcaatattattagcctcggtgtcaagcccgatggaaagaccgatgcc
tcgtctgtgcttcaaatgacatgggctaaggcttgtgactcgtctacaccggccactatt
tacgttcccaagggtatattctacgttcgaagtgtgagctttaatgggccttgtaagaac
aatgttattactgttctcattgatggaactcttgtggcttcctcggacattcaagtttta
gctaagactaaatcttggattgagtttagtcacatagatgggctttccattactggcggt
attatcgatgggcaaggaactgccttatggaattgtaaacactcggggaagagttgcctc
actggagccacgagtcttcgaataaatgatgcacaaaacgtgaacatcaatggattatct
tcaattaacagccaaaagttcaacattgtggtgagtgggtgtcaaaacgagcatatgaca
agagtgaatgtctcggctgcaggcgacagtccaaacactgatggcatccatgtggaacaa
tcatcagatgtgaccatcctcaactcgagcattagcaacggcgacgactgcatctcaatc
agtctagggacctccaacttgtgggtggaaagtattacatgtggacctggacatggaatc
aacattgggagcttggggataaaggccgaggaggatggagtgcataacgttacagtgaca
ttatctactttcatcgggcttaagaatggagtaaggattaagtcttggggaagaccaagc
cgtggatttgctacaaaagtttattttcaacacatcattatggataatgtgaaagatcca
atcataattgatcaaaattactgtccacatgaggaagactgccctggtcaggcttctgga
gttaaagttagcgaagtaacatatgaagacatcaagggaacttccgccactgaaatagca
atcaattttgattgtagcccaataaatcattgcactggattaagcttgaaagacatacac
ctaacttacgagaatcacatcgctaaagcttcatgtaaaaatgccgaaggaactacctct
ggtgtggttgaaccttctggttgcttagcagacgaatctaatttttcgcttaacgtgttg
gtgctaaaattaaaggatagtaaaaatgctctagagggcttataa
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