Cucurbita moschata (crookneck pumpkin): 111440157
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Entry
111440157 CDS
T05248
Name
(RefSeq) general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111440157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111440157
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
111440157
Prokaryotic type
Archaeal type
TFE
111440157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
wHTH-PRTase_assc
KapB
HVO_A0261_N
YBR138C_C
DUF7836
Zn_Ribbon_TF
WHD_RecQ_mid_bact
Zn_ribbon_SprT
GntR
Dimerisation
Zn_ribbon_8
MerR
Motif
Other DBs
NCBI-GeneID:
111440157
NCBI-ProteinID:
XP_022933237
UniProt:
A0A6J1EZ78
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSIEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
NLKLHSKQLRRTLRFLEEEKLITRDHRRETAKGAKIFSAAVAATADGQRPTKEGDEKIKM
HTHSYCSLDYAQIYDVVRYRVHRMRKKLKDELEDKNTVQEYICPNCSRRYTALDALRLIS
LEDEYFHCENCNGELVAESDKLAAAQGGGDGDDNARKRRHEKLKDMLQKMEVQLKPLMEQ
VSRVKDLAVPEFGTLLAWEAHASAAARANGDLNGNDPSKSSQGLGYGGAPMPFVGETKVE
VAFSGADGKGADVKSESETSLKVLPPWMIKKGMNLTKEQRGEVKEESKMDAGSASAQFFD
DKKSLANDDDKTNIQDEYVKAYYAAILKKQQELEEAAKSEQNISSTEVTENNTNSNRQVG
MKAKREEEDDDDIEWEEAPTGGNANENYKVDLNVEASASVEDDEEEDDVDWEEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgaaccttttaacaggttggtgaagctagctgcgagagctttttatgatgat
attacgactaaaggggataatcagcccaagaccggtcggagtgataataggggaatcgcg
gttgtcgttctcgatgctctcacgagacgacaatgggttcgggaagaagatttggcaaag
aacttaaaactacattcgaagcagttacgtcgaaccctaaggtttttagaagaggaaaaa
ctgattactcgagatcatagaagggagacagctaagggagcaaaaatatttagtgctgca
gttgctgccacagctgatggtcaacgcccaacaaaggagggggatgaaaagattaagatg
cacacgcactcttattgctcgctagactatgcacagatttatgatgtggttagatacaga
gtgcaccgcatgaggaaaaaactgaaagatgaattagaggacaagaacacagttcaggaa
tatatatgccccaactgttcgagaaggtacactgctttggatgccctgcgattaatctct
cttgaagatgaatacttccactgtgaaaattgcaatggagagctggttgcagagagtgac
aaactggctgctgctcagggagggggggatggtgatgataatgccaggaagcgtcgacat
gaaaaattaaaggacatgcttcagaagatggaggtacagcttaaacctttaatggaacaa
gtcagcagagtcaaagatttggcagttccagaatttggaactcttttagcatgggaagct
catgcaagtgcagctgcacgtgcaaatggtgatctgaatggcaacgatccttcaaaatcg
tcacaaggtttaggatatgggggagcaccaatgccttttgttggtgagaccaaggttgaa
gttgccttttctggggctgatggcaagggagcagatgttaaatctgaatctgagacgagt
ctgaaagtcttacctccttggatgatcaagaaaggaatgaacctcacaaaggaacaacgt
ggggaggtcaaagaggagtcaaagatggatgctggttcagcttctgctcagttttttgat
gataaaaagtcattagccaatgatgatgataaaacgaatatacaggatgagtatgttaaa
gcttattatgctgctatactgaagaagcaacaagagcttgaagaagctgctaagagtgaa
cagaatatttccagcactgaggttacagaaaataacacaaattccaatcgccaggtggga
atgaaggcaaaacgtgaagaggaggatgatgatgatattgagtgggaggaggctccaaca
gggggtaatgcaaatgaaaattacaaggttgacttgaacgttgaagcatcagcttcggta
gaggatgatgaagaagaagatgatgtggattgggaggaaggttga
DBGET
integrated database retrieval system
