Cucurbita moschata (crookneck pumpkin): 111440973
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Entry
111440973 CDS
T05248
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111440973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111440973
03036 Chromosome and associated proteins [BR:
cmos03036
]
111440973
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111440973
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111440973
PBAF complex
111440973
GBAF(ncBAF) complex
111440973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
111440973
NCBI-ProteinID:
XP_022933590
UniProt:
A0A6J1EZH8
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSVNNNNNANSNSVVRNIGGTMPVNNSPSSNNLGRNIGAASHFGNSGMVQQARPMNHHSQ
SQSQMHGGTHFSGHFQLSEPQSRIMSQVQYTQAHAQAQAQSAHAQFQAHTQPVQLHSAKA
SNVTITPSVSTPGTGSSKRPTQKPPSRPPGSSNSSASSPFKTMELTPAARRKKAKLPEKQ
IPDKVAALLPESAIYTRLLEVEGRIDAALARKKNDIQESLKNPSRIQKTLRIYVFNTFEN
QNHNSSDQKNVESPSWSLKITGRILEDGKDPAIAGDMQNYDSTYPKFSSFFKKITIYLDQ
SLYPDNHIILWESSRSPVLQEGFEVKRKGDKEFTAVIRLDMNYTPEKYRLSPALSDVLGL
ETDTRSRIMAALWHYVKANKLQNSNDPSFFTCDPGLRKVFGDEKVKFSMVSQKISQHLIP
PPPINLQHRVKISGNSPVGTTCYDVVVDVPFPIEKQMSAFLANLEKHKDIDSCDELITTA
VKKIQEHYQRRAFFLGFSQSPAEFINTLISSQTKDLRIVAGDASRLAEKERHSNFYSQSW
LEDAVFRYLNRKPAGSDVPGSA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaataacaacaacaatgctaatagtaacagtgtggtgaggaatattggggga
actatgccggtgaataacagccctagtagtaacaatttggggaggaatattggggcagcc
tctcattttgggaattcaggcatggttcagcaagcaaggccaatgaatcatcattctcag
tcacagtctcaaatgcacggcgggacgcatttttcaggtcattttcagttgtccgagccg
cagtcgcgtataatgtctcaggtacagtatacgcaggctcatgcacaggcacaagctcaa
tctgctcatgcacagtttcaagctcatactcaacctgttcagctgcatagtgctaaggct
agtaatgttactataacaccctctgtgtcaacacctgggacagggagttctaagaggcct
actcagaagccaccttctaggcctccaggatcttctaacagtagcgccagttcacctttt
aaaaccatggagttaactccagctgctagaagaaagaaggctaagcttcctgagaaacaa
atacccgataaagttgctgctcttctgccagaatctgccatctatacccgactgctcgaa
gttgagggtcggatagatgctgctctggcaagaaagaaaaatgatattcaagagtcttta
aagaatccttcgcgcattcagaagaccctacggatctatgtcttcaatacgtttgaaaat
cagaatcataatagttctgatcagaagaatgtagaatccccttcttggtcgcttaagata
actgggaggatcttggaagatggaaaagatcccgctatagctggagacatgcagaattat
gattctacttacccaaaattttcatctttcttcaagaaaatcactatatacttagaccag
agcctttatccagataaccacataattttatgggagagttctcgttctcctgttctgcaa
gagggatttgaagtgaagagaaaaggagataaagaatttactgcagtgataagattggac
atgaattacacgcctgaaaaatatcgtctttcacctgctttatcagatgtgcttggactc
gaaacagacacccgctcaagaattatggctgcactatggcattatgtgaaagctaacaag
ttgcagaattcaaatgatccttctttcttcacatgtgatccaggtctacgaaaagtgttc
ggtgacgagaaggtcaagttttctatggtatctcagaagatatcgcaacatttaattcct
ccaccacccataaacttacagcatagagttaagatttcgggaaattctcctgttggaact
acatgttatgatgtcgtggtggatgtaccgtttccaatagaaaagcaaatgtcagcattc
ttggcaaacctggagaagcataaagatatagattcatgtgatgaattgattactactgca
gtaaagaagattcaagagcactaccaaaggcgagctttctttcttggcttcagtcagtct
ccagcagagtttatcaatacgttgatatcttctcaaactaaggatttaaggatcgttgct
ggtgatgctagccgtcttgcggagaaagaacgtcactctaatttttacagtcaatcctgg
ttggaggatgctgtgtttcggtacctgaaccgcaaacctgctggaagtgatgttcctgga
agcgcttaa
DBGET
integrated database retrieval system
