Cucurbita moschata (crookneck pumpkin): 111441134
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Entry
111441134 CDS
T05248
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111441134
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111441134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Ctf4_C
EIF3I
Beta-prop_IFT122_1st
Beta-prop_EML
eIF2A
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_ELP1_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
RAB3GAP2_N
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
111441134
NCBI-ProteinID:
XP_022933837
UniProt:
A0A6J1F0Y1
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MKIRSVKLREAHKAASNGKASFCSVLWDQQAYHIVTASSSESAISIHDSLLPSNNPKIIH
HHREGVTALALSPNSTCLASGSMDRSVKLYKFPGGEFETNITRFTLPIRTLAFNKSGSLL
AAAGDDDGIKLINTIDGSIARVLKGHKAAVTGLAFDPNSEYMASVDSFGTVIFWELQSGS
IIHNLKGIAPSTGSDPSVLNVLCWSPDGEMLAVPGLRNDVVMYDRDTAEKLFSLRGDHTQ
PICFLSWSPNGKYMATSSLDRQILIWDVDQKLDIDRQKFDERICCMAWKPIGNALAVIDV
MGKYGVWESVVPSSMKSPTEDIPKLQSRNSNGLLLFDEEDEEPSEHGNLSDLGEDSHYES
EFPTRKRLRKHSTNEEILDEADSEDFSLLPKSESYKMSRRVKKDKTDNIDEGDINIATYS
KLKLREAFQPGATPLQPGKKRFLCYNMLGSITTFEHDGYSHIEIDFHDTGSGPRVPSMND
HFGFTMAALNENGSVFANPCKGEKNMSTLMYRPFGSWANNSEWSMRFDGEEVKVVAVGTR
WVAAFTSLNYLRIFTDGGLQKHILSLDGPVVTASGFKDELAFVTHSSTCLPSNDQMLEFR
ILNISNGTQLLRGHLPLTPGSHLAWFGFSEEGKLSSYDSKGVLRVFTSQYGGSWVPLFSA
RKERKSDENYWVVGLNTSKLFCVICKNSESYPQVTPKPILTLLNLSFPLALSDLGAEALE
NEFMMNNMHLTQIHGRMEEMALLGLYDTELDDEAFCIEAAQDRCILRLIASCCNGDKLVR
ASELVKLLSLEKSVKGAIKLVTALKLPNLAERFNAILEERLLNEAKGTMETTTLSRSKCS
GSVLPNAATSSSTLNCAVKGRSSEVSRPSSPKGPILSAPLFTKKLKSDGAKFNDGRTEDK
QSSGVVKKGTENSGGDTADVKKAVSLSKIESTTLETNQHLNSCNSEKVKAGDVNQQAQCT
RPSNPFLKSSIK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccggtcggtgaagctccgagaagcccacaaggcagccagcaatggcaaggct
tcgttttgctccgtcctgtgggatcaacaagcgtaccatattgtcactgcttcgtcttcc
gaatccgccatatccatccatgattctcttcttccttctaataacccgaagatcattcat
catcatcgcgaaggggtcacggctctggctcttagccccaattccacctgcctcgcttct
ggatccatggatcgatccgtcaagctttacaagtttcccggtggagaatttgagaccaat
atcacaagatttacgctgccaatacgtacccttgcgtttaataagtccggaagcctcttg
gcagcagctggcgatgacgatggtattaagctaattaacacgattgatggttcaattgct
agggttctgaaaggacataaagcagccgttactgggttggcgtttgaccccaatagtgag
tacatggcatcggtggattcatttgggactgtaattttctgggaactccaatctggaagt
ataatacataaccttaaaggcatagctcctagcacaggttcggacccttccgttctgaat
gttttatgctggagccctgacggcgagatgttagcagtcccaggattaagaaatgatgtt
gtgatgtatgatagagatactgctgaaaagctattttcattgaggggagatcacacccag
cctatttgtttcctgtcatggtcacctaacggaaaatacatggctacttcttccttggac
aggcaaattctgatatgggatgttgatcaaaagctggatattgatagacagaaatttgac
gagagaatatgttgcatggcatggaagccaattggcaatgcattggctgttattgatgtc
atgggtaagtatggggtgtgggaatcagttgttccatcttctatgaaatctccaactgaa
gatatcccaaaattgcaatcaaggaatagcaacggcttgctcttgtttgatgaagaggat
gaggagcctagtgaacatggcaatttgagtgatcttggagaagatagccattatgaatct
gaatttccaactcgaaaaaggttgcgtaagcattcaacaaatgaagaaatcctggatgag
gctgatagcgaagattttagccttctcccgaagtcggaatcctataaaatgtcacgtcgt
gttaaaaaagataagacagataatattgatgagggagatataaacattgcaacatatagt
aaattgaaactacgggaggcatttcaaccaggagctactcccttgcagccaggaaagaaa
cgctttttgtgttacaatatgcttggaagtataacaacttttgaacatgatgggtactcc
cacatagagatagatttccatgacactggcagtggcccgcgagttccttcaatgaatgat
cattttggttttacaatggctgcactgaatgaaaatggtagcgtctttgcaaacccttgt
aagggtgagaagaatatgagcactctaatgtatcgcccatttggtagctgggcaaataac
agcgagtggtcgatgagatttgatggagaagaagttaaggtcgtggcagttggtaccaga
tgggtggctgcatttacaagtcttaattatcttcgcatcttcacagatggtggtttacag
aaacatattctttctctggatgggccagtggtgactgcatctggcttcaaggatgaactt
gcatttgtgactcattcttctacctgtcttccctcaaacgaccagatgctagagttcaga
atattaaacatctctaatggaacacagctcttaagaggacatttgccattaactccagga
tcacatctcgcatggtttggatttagtgaagaaggaaaattgagttcctacgattccaag
ggtgtactcagagtgtttacaagtcaatatggtggcagttgggtaccattattcagtgcc
cgtaaagagaggaagtcggatgaaaattattgggtggttgggttgaacacaagcaagttg
ttctgtgtgatatgcaaaaattctgagtcatacccacaggtgacacctaaaccaattctt
actctactaaatctttcatttcctcttgcactctctgacctgggtgcagaagcacttgag
aatgagtttatgatgaataatatgcacctcacacagatccatgggagaatggaggaaatg
gcattacttgggttgtacgacacagaactagatgatgaggcattctgtattgaagctgct
caagacagatgcatcttaaggctcattgcttcctgctgcaacggtgataagcttgtcaga
gcttccgaactagtaaaacttttgtcgctggagaaatcagtgaagggtgcaattaagctg
gttactgctttgaagcttcctaacttggcggaacgtttcaatgccatattagaggaaagg
ttgcttaatgaagccaaagggaccatggaaaccaccaccctttcaagatctaagtgcagt
ggatctgtgttacctaacgctgcaaccagcagtagtacactaaattgtgcagtaaaaggc
agaagttcagaagtgagtcgtccatcctcacctaaaggcccaatactctctgcacctctg
tttacaaagaaactgaagtccgacggagcaaaattcaatgatggaagaacagaggataaa
caaagttcaggggtggtgaagaagggaacagaaaacagtggtggtgacacggcagatgtg
aagaaagcagtgtcattgagtaagatagagtccactacccttgaaactaaccaacatttg
aattcatgtaacagtgagaaggtgaaggcaggagatgtaaatcaacaagctcaatgtact
cgcccctcgaatccgttcttgaagtcatcaatcaagtaa
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