Cucurbita moschata (crookneck pumpkin): 111441251
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Entry
111441251 CDS
T05248
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111441251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111441251
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111441251
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
111441251
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
Motif
Other DBs
NCBI-GeneID:
111441251
NCBI-ProteinID:
XP_022934020
UniProt:
A0A6J1F6G8
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MKEGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV
EVTGHKAHGAVPAPGSIVTARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI
DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMIPISWTEMQC
PLTGQIQQRKVAKVGGS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaggcgaggaagagactgaattcgtgactccaggtgaagttctcggaaaattt
tcggacatgaaacctgggaaaggcgcttatgtagctaacaacactgtttatgcttctctt
tctggtttccgccgcattatttcccctccaactgattcttcggactcgagaccaactgtg
gaagtgactggtcataaggcccatggtgccgttccagctcctggatcaatcgtcactgct
cgagttacaaaagtaatgcctagaatggcatcagctgatatcatgtgtgttggtccaaag
tctgtgaaggagaagtttagtggtgttataaggcaacaagatgtccgagcaacggagatt
gataaagtagacatgcatttgtcctttcgacccggtgacatcgtcaaagctcttgttctt
tctctaggagatgcaagggcctatcatctttcaactgcaaaaaacgaactcggggtcgtc
tctgcagaaagtacagcaggtgcagtaatgattcccataagctggacggaaatgcagtgt
ccattaacaggccaaattcaacaaagaaaagttgccaaagttggaggatcatga
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integrated database retrieval system