KEGG   Cucurbita moschata (crookneck pumpkin): 111441251
Entry
111441251         CDS       T05248                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111441251
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111441251
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111441251
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     111441251
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 111441251
NCBI-ProteinID: XP_022934020
UniProt: A0A6J1F6G8
LinkDB
Position
Unknown
AA seq 197 aa
MKEGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV
EVTGHKAHGAVPAPGSIVTARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI
DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMIPISWTEMQC
PLTGQIQQRKVAKVGGS
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaaagaaggcgaggaagagactgaattcgtgactccaggtgaagttctcggaaaattt
tcggacatgaaacctgggaaaggcgcttatgtagctaacaacactgtttatgcttctctt
tctggtttccgccgcattatttcccctccaactgattcttcggactcgagaccaactgtg
gaagtgactggtcataaggcccatggtgccgttccagctcctggatcaatcgtcactgct
cgagttacaaaagtaatgcctagaatggcatcagctgatatcatgtgtgttggtccaaag
tctgtgaaggagaagtttagtggtgttataaggcaacaagatgtccgagcaacggagatt
gataaagtagacatgcatttgtcctttcgacccggtgacatcgtcaaagctcttgttctt
tctctaggagatgcaagggcctatcatctttcaactgcaaaaaacgaactcggggtcgtc
tctgcagaaagtacagcaggtgcagtaatgattcccataagctggacggaaatgcagtgt
ccattaacaggccaaattcaacaaagaaaagttgccaaagttggaggatcatga

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