Cucurbita moschata (crookneck pumpkin): 111441471
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Entry
111441471 CDS
T05248
Name
(RefSeq) denticleless protein homolog
KO
K11790
denticleless
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111441471
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111441471
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
111441471
NCBI-ProteinID:
XP_022934252
UniProt:
A0A6J1F268
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All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEISRSRSFFQDLSSREFNGFRVRKRPRFSADIALSFKEVGALAVEHDGDQTPPLAVSFC
KTLKNSHIFALSDEDGFVSLFNTCRRFSLFSSHEENSEKSRVCEWEAHRNAVFDVCWIKD
DTQMITASGDQSMKLWDVQEMKCIGILRGHKGSVKSISSHPTNHDIIVSGSRDGSFALWD
LRTSSCCKVGSEELCLQATAVVKGAHLSSHAKRIRRQKSASKSITSVLYLKDELTVATAG
AVDSVVKFWDTRNLKSATTQCQPKSSDKDTRLHGISSLSQDANGAFLSTSCMNNRIYLYN
VLQLEKGPVKSFSGCQIDSFFVKSVISPDASYLLSGSTDGNAHVWQVDKPHEDPITLTKH
NGEVSAVDWSSFEVGKFVTSSDDFTVRIWNSQNNSCSSTKRPTSGNRKRIMAMPTIEQAK
DSDTSDSPYFDRACAAPSNSNAMDMEHKLGTPESKVRRFSSDAAALIESFEKTPEANSKS
PSSVLNPPSSMKKTIRDYFLVAP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagatttcaagatcacgatcgttctttcaagatctcagttccagagagttcaatgga
ttcagagttcgaaagcggccgcgattttccgctgatattgctcttagcttcaaggaagtc
ggagctttagctgttgaacacgacggcgaccagacgccgccattggccgtttcgttctgc
aagacgttgaagaactcgcacatttttgcactttcggacgaggatgggttcgtaagcctg
ttcaatacttgcagaagattttcattgttttcatctcacgaggaaaattcagagaagtct
agggtttgtgaatgggaagcccatcgcaatgctgtgtttgatgtttgttggatcaaggac
gacactcaaatgattacagcctccggggatcaatctatgaagttatgggatgttcaggaa
atgaaatgcataggaatattgagagggcacaaaggaagtgtgaaatctatatcttctcac
ccaactaatcatgatatcattgtatctggttcaagagatggttcatttgctctctgggac
ttgagaaccagttcttgttgcaaagttggaagtgaggagctgtgtctgcaagcaactgca
gtagttaaaggagctcatctttcctctcatgcaaagcgcatcaggcgtcaaaagtctgct
tcgaagagcataacttctgttctttatctaaaagacgaactcaccgtagccacagctggt
gcagtggatagcgtagtgaagttctgggatacaagaaatttgaaaagtgcaaccactcag
tgccaacccaaatccagcgataaggatacgagattacatggtatatctagcctatcccaa
gacgccaatggggcatttctttcgacatcttgcatgaataatagaatatatttgtacaat
gtacttcagctggagaagggtcctgtaaaatcattttctggatgccaaatagattctttc
tttgtaaagtctgtaatcagtcctgatgcttcttaccttctcagtggttctaccgatgga
aatgcccatgtttggcaggtggataagcctcatgaagatcccatcaccttaacaaaacat
aatggagaagtttcggcggtggattggtcttcctttgaagtcgggaagtttgtgacatct
tcagatgatttcacggttcgaatatggaattctcaaaacaacagttgcagctcaaccaaa
aggccaacttcaggcaaccgaaagagaattatggcaatgcctaccatagaacaggccaaa
gactctgatacttcagattctccatacttcgacagagcttgtgctgctccctccaattca
aacgccatggacatggagcataaattaggcactcccgaatccaaggtaagaagattttca
tcagatgctgctgctttaattgaaagctttgagaaaactcctgaagccaattcgaaaagc
ccatcttctgttctcaatcctccttcctccatgaaaaaaacaatccgagattactttcta
gttgctccataa
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integrated database retrieval system