Cucurbita moschata (crookneck pumpkin): 111441479
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Entry
111441479 CDS
T05248
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111441479
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111441479
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
111441479
NCBI-ProteinID:
XP_022934263
UniProt:
A0A6J1F768
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MHQPTHFLIFFMSFPLFSLCFGSFHEYPLPVSQYHDQIYGHYPKPRWNTGFYGSTTRQDR
VSSLSGSPKVVNVDDFGAKGNGQDDSKAFELAWKKACSSSKAMILVPKGRTYYLKPITFS
GPCRSPLTLKIDGMIKASPRMSDYDDDRRHWLKFEGVDNFVVEGNGIINGNGKKWWQNSC
KVNKELPCRGAPTAVTFYQCINLVVANLKLENAQQMHLTFQKCTNVKALNLRVVAPENSP
NTDGIHVTETQNVIIRNCVIGTGDDCISIVSGSRNVRAMDITCGPGHGISIGSLGAGNSE
AEVSNIRVDRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMNNVRNPIIIDQNYCDKEE
KSCPQQNSAVKVSNVVYKNIRGTSASDDAIRFDCSKSSPCQDISMLGVHLVRQGDDVATA
SCENVRLKNRWKVYPQCSS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaaccaacccatttcctcatctttttcatgtcatttcccctgttttctctctgt
tttggcagtttccatgagtaccctcttcctgtttctcaatatcatgatcaaatttatggt
cattatccaaaacccagatggaacacgggtttttacggctcgacgacgaggcaggatcga
gtaagctcgctttcgggttcgccaaaggtcgtgaatgtggatgattttggagctaaggga
aatggacaagatgacagtaaggcatttgagctagcttggaagaaggcttgttcttctagt
aaggcaatgattttggtgcctaaaggcaggacatattatcttaagccaataactttttca
ggtccttgtagatctcctttgacactaaagatcgatggaatgatcaaagcttctccaaga
atgtcggattacgatgacgatcgacgacattggcttaaattcgaaggcgtcgacaacttt
gttgtagaaggcaatggtatcatcaatggaaatggcaaaaaatggtggcaaaactcttgc
aaagtgaacaaagaacttccttgcaggggagcaccgacggctgtaactttctaccaatgc
atcaacttggttgtggctaacctgaaactagaaaatgcacagcaaatgcatctgacattt
cagaaatgcaccaatgtcaaagctttgaatcttcgggtcgtcgccccggagaatagtccc
aacacggatggaattcacgtcacggaaactcaaaatgttataataaggaactgtgtcatt
ggaacaggggatgactgcatttctattgtaagtgggtcaagaaatgttagagcaatggat
atcacttgtgggccaggacatggaattagcattggaagcttaggagctggaaactcagaa
gctgaggtttcaaatataagagtagatagagcattgatatcaggaaccagtaatggggtg
agaataaagacttggcagggaggctctggatatgctaaaaacatcatgtttcaaaacgtt
gtcatgaacaacgtgcgcaatccaataattatagaccagaattactgtgataaagaagaa
aagtcatgcccacaacagaattcagcagtgaaagtaagcaatgtggtgtacaagaacatt
agaggaacaagtgcttctgatgatgccataagatttgactgcagcaaaagctccccttgt
caagacatttccatgcttggagttcatctagttagacaaggagatgatgttgccacagct
tcctgtgagaatgttaggttgaaaaatagatggaaagtttatccacagtgctcctcataa
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