Cucurbita moschata (crookneck pumpkin): 111441500
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Entry
111441500 CDS
T05248
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111441500
Membrane trafficking [BR:
cmos04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
111441500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
111441500
NCBI-ProteinID:
XP_022934299
UniProt:
A0A6J1F269
LinkDB
All DBs
Position
Unknown
AA seq
1423 aa
AA seq
DB search
MASNPPPFQVEDQTDEDFFDKLVEDDFVAPDDSGSKFLDGSDSDDAKAFANLSMNDADNT
FKDSGGVGDREHEAVLEKGSVEADPGALGAHAEEKASLVSSNSVGCVSVLESGNDGIASE
STSDSLVSKSDESAGPAIKEVGWSSFYADSSQNWGHGFGSYSDFFNDLGINEAGNPGGSL
ENNLNGAATIKSSADGNYANTSVNYVQYQTDQQVYEGSTDQVSAGQDLSSSQQWENLYPG
WKFDSVSGQWYQVEDSAAAANVQGTFDANLNGEWADVSGTKTEAAYLQTAQSVAGTVTET
STTDDVSNFNQVSQGTTGYPEHMYFDPQYPGWYYDTIAQVWCSLESYNSSIKSTNEVHVQ
DNDNGYVSPNSYNYSNSSIYGVHGQPNTYGSSGIDNQGHDDKLTGSYHKENQQSSTTWQT
ESVSSQAGPNFGGNQVLDRSTSPDFSVKKEQQKSISSFGTVPSYFQPSQGRNEVNGPTSL
NSFPSTMDYGHQFHQENSKEHEHMPLSSDYYSNQTHVTNLKQSFHGGHQSSFASNIGRSS
AGRPPHALVTFGFGGKLVVVKDSSSFGNSTYGSQDPVGGTISVLNLMEVVMGNANANAFG
NDVGANNYFSALCQQSFPGPLVGGSVGSKELQKWIDERIANCETSGMDYRKGEALRLLLN
LLKIGYQHYGKLRSPFGTDTVLRESDNPESAVATLFASAKMNNVQFNNYHSLSRHCLQTL
PSEGQMRATASEVQSYLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYIDTVKQMALK
QLVAGSPLRTLCLLIAGQPAEVFSTDTTSSINPLGGSMAQNSSQFSANSMLDDWEENLAV
ITANRTKDDELVIIHLGDSLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKF
PRTYASPEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLAEVGKVSDSLKYCQAVL
KSLKTGRAPEVETWKQLLFSLDERIRAHQQGGYTANLAPGKLVGKLLNFFDSTAHRVVGG
LPPPAPSNSHGNEHYHEPVVPRVSTSQSTMAMSSLIPSASMEPISEWTTDSSKMTVSNRS
VSEPDFGRTPRQQNHSSSSKESISADGQGKTSDSRASRFARFGFGSQLLQKTVGLVLGPR
ADRQAKLGEKNKFYYDEKLKRWVEEGVESPAEEAALPPPPTTTTFQNGGTDYNLKSVLKK
EAPSSDGNVEFPTANPTPVENSSGIPPIPPSSNQFSARGRMGVRSRYVDTFNQGNGSSAN
LFQSPPVPSIKPKVAANAKFFVPSPAMSTEPTEDTIQEPSREDTTTSEHPSTSTTNDSFS
TPSSTTMPMQRFPSMGNMSNNGANRSGNGPLVANSRRTASWSGANFSDALSPPRKPTGLK
PLGEALGIPPSSFMPSEPPPSVHTLMNGGGGGGMGDDLHEVEL
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaatcctcctccatttcaggtggaggatcagactgatgaagatttctttgat
aaattggtggaagatgattttgtggcgcccgatgattcaggatccaagttcctcgatgga
agtgattctgatgatgccaaggcgtttgccaatctgagtatgaatgatgcggacaataca
ttcaaggattctggtggtgttggtgaccgtgagcatgaagctgtgctggagaagggttcc
gtggaggctgatccaggagcgttgggagcacatgcagaggagaaggcttcattggtttct
tctaattctgtcgggtgcgttagtgtgttggaatcgggaaatgatggtattgcatcggaa
tcgacgtcagattcgttggtgagcaagagcgatgaatctgctggtccggcaataaaggag
gttggatggagttcgttttacgctgattcatcgcagaattgggggcatgggtttggatcg
tattcggattttttcaatgatttgggtattaatgaagcagggaatcccggtgggtccttg
gagaataatttgaatggtgcagcaacaattaaatctagtgcagacgggaactatgcaaat
acctctgttaattatgtgcagtatcaaaccgaccagcaagtttacgaaggatccacagat
caagtttcggctgggcaggatttaagtagcagtcagcagtgggaaaatctctatccaggg
tggaagtttgattcagtttctgggcaatggtatcaggttgaggactctgctgcagccgca
aatgtccaaggtacctttgatgccaatttgaacggagaatgggctgacgtttctggcacg
aaaactgaggctgcttatttacaaactgctcagtctgttgcagggactgtaactgagact
agcacgacagatgatgtttctaactttaatcaggtatcacaagggactactgggtaccct
gaacatatgtattttgatcctcaataccctggttggtattatgacacaattgctcaagta
tggtgctccttggaatcctacaattcatcaattaaatcaactaatgaagttcatgttcag
gataatgacaacgggtatgtatcaccgaacagctataattatagcaacagtagtatttat
ggcgttcatgggcaacctaacacatatggatctagtggtattgataatcaaggccacgat
gataaattgacaggctcttatcataaggaaaatcaacagagttcgactacttggcaaact
gaaagtgtttcatctcaggctggcccaaattttggtggaaatcaggtactggataggtct
acaagtcctgatttttctgtaaaaaaagagcagcagaagtctattagttcttttggaaca
gttccatcatacttccaaccaagtcaaggtcgtaatgaggtcaatggacctaccagctta
aatagctttccctcaactatggattatggccatcagtttcatcaggagaattcaaaggag
catgaacatatgcctctatcgagtgactactatagcaatcagacacatgtgactaatctt
aaacaatcttttcacggaggtcatcagtcttcttttgcttcaaatattggaagatcttct
gctggacgtcctccacatgcattagtaacattcggttttggaggtaaacttgtagtggtg
aaagacagcagctcatttggaaactcaacttacggaagtcaggatcctgttggagggaca
atttctgtcttgaacttgatggaagttgtcatgggtaacgctaatgccaatgcttttggc
aatgatgttggtgcaaataattactttagtgctctttgccaacagtcctttcctggtcca
ttggttggtggaagtgtggggagtaaagagttacagaaatggattgatgaaaggattgca
aattgtgaaacatcaggaatggattacagaaaaggcgaagcattgaggctccttcttaat
ttgcttaagataggatatcagcattatgggaaacttcgatcgccatttggcacagacact
gtgttacgggaaagtgataatccagaatcagcagttgccactctttttgcttctgctaag
atgaataacgtacaattcaataactatcattctcttagccgccactgcttgcagacattg
ccttctgaaggacaaatgcgggcaactgcttctgaggttcagagttatcttgtatccggt
agaaagaaagaggctttacaatgtgcacaagaaggtcagttatggggacctgcccttgtt
cttgcttcacaacttggtgaccagttttacattgatactgtgaagcaaatggctcttaag
cagttggtagctggatcacctttgcggactctatgcctgcttattgctggacaacctgct
gaagttttttctacagatacaacgtctagcatcaatcctctgggtggtagcatggctcaa
aattcttcacagttttctgcaaatagtatgctggatgattgggaagaaaatttagcagtg
ataactgccaacaggacaaaagatgatgaacttgtaattattcatcttggagactcctta
tggaaagaaaggagtgagataactgctgctcacatttgctatttagttgcggaggcaaac
tttgagtcatattcggacagtgctagactctgtcttattggagctgatcactggaaattt
cctcgaacctatgctagcccagaggctattcagagaactgaattatacgagtactccaaa
gttcttggaaattctcagtttatccttctaccatttcagccatataagctcatatatgct
tacatgttagcggaagtggggaaagtttcagactcattgaagtactgccaagcagttttg
aagtcacttaaaactggccgtgcacctgaagttgaaacgtggaagcagctgctgttttct
cttgatgagaggattagagcacatcaacagggtggatatacagctaatttagcccctgga
aaattagtaggaaaattgctcaacttttttgacagtactgcacatcgtgttgttgggggg
ttaccacctcctgcaccatcaaactcacatggtaatgaacattatcacgaaccagtagtc
cccagagtatcaactagtcagtcaacaatggcaatgtcatccttaattccatctgcttct
atggaacccataagtgagtggactaccgatagcagtaaaatgacagtttcgaacaggagt
gtttcagagccagattttggcagaactccaagacagcagaatcatagcagttcttcaaag
gaatcaatttcagctgatggtcaaggaaaaacatcagattcaagagcatctcgttttgct
cgttttggttttggttcacaattattgcaaaagactgttggattagtcttggggcctcgt
gcggatcggcaggccaaattgggtgagaagaataaattttattatgatgaaaagctgaag
agatgggttgaggaaggcgttgaatctcctgcagaagaggcagccctaccaccacctcct
acaacgacgacattccagaacggtggaactgattacaacttgaaatctgtactaaagaaa
gaagcaccatccagtgatggaaatgtggagtttccaaccgccaatcctactcctgtagaa
aatagttccggaatccccccgatcccaccaagttcaaaccaattctcagctcgtggacgg
atgggtgttcgttcaaggtacgttgacaccttcaaccaaggcaatgggagctcagccaac
ttgtttcagtcgcctcccgtcccatcaattaagccaaaggttgctgccaatgcgaaattc
tttgttccaagtcccgcaatgtcaactgaacctacagaggatacgatacaagaaccctct
cgggaggacaccacgaccagtgaacatccttcaacatccaccacaaacgattcattttct
actccctcatcaactactatgcctatgcaaaggtttcctagcatgggaaacatgtcaaac
aatggtgcaaatagaagtggcaacggtccgttagtagccaactcccgacgaaccgcatca
tggagtggtgcaaacttcagtgatgcccttagcccccctcgtaaaccaacgggacttaaa
cctctaggtgaagcattgggcatacccccatcatcttttatgccgagtgaaccaccaccc
tcggtgcacacgctgatgaatggtggtggtggtggtggcatgggagatgacctccatgag
gtggaactttaa
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integrated database retrieval system
