KEGG   Cucurbita moschata (crookneck pumpkin): 111441617
Entry
111441617         CDS       T05248                                 
Name
(RefSeq) transportin-3 isoform X1
  KO
K15436  transportin-3
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013  Nucleocytoplasmic transport
cmos03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111441617
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111441617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmos03016]
    111441617
Transfer RNA biogenesis [BR:cmos03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    111441617
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th IBN_N
Other DBs
NCBI-GeneID: 111441617
NCBI-ProteinID: XP_022934436
UniProt: A0A6J1F1T5
LinkDB
Position
Unknown
AA seq 1017 aa
MELRMKVSQAVHVLNHDTQSCNRVAANQWLVQFQQTGAAWEVATAILTSDRVQLPLSSFV
PDLEVEFFAAQILKRKIQNEGHLLQLGVKDALLNALLVAAKKFSSGPPQLLTQICLALSA
LILRTVEHGKPIDRLFYSLQNLQSVDNGNLAVLEMLTVLPEEVVDNQNADCKISSSCRSQ
YARELLLHTPMVLEFLLQQSEKGFDCGTQMQEKNRKILRCLLSWVRVGCFSEIPQGSLPT
HPLLNFVLKSLQDATSFDLAIEVLVELVSRHEGLPQVLLCRVHFLKEMLLFPSLSSGDEK
VISGLACLFSEVGQAAPSLIVDASAEALALADALLSCVAFPSEDWEIADSTLQFWSSLAS
YILGCDENNSANRKNVEDVFLSIFSALLDGLLLRIQVVESAFNEERGMIDLPDGLIHFRM
NTVELLVDICQILRSSRFMEKLFFSGWTNGNVPIPWKEVESKLFALNVVAEVVLQEGQSF
DFSVITQLVTMLSARPSNEIKGIMCLVYRSLAEVVGSYFRSISAFHTDARPLLLFLATGI
TESVSSHACAFALRKICEDATAVIFELQNLEILIWIGESLEKLHLPLEDEEEVVSAVSLI
LGSVPNKELKSNLLARLLSSSYEAIEKLVDEDNAQSLRQNPATYTKILTSAVRGLYRMGT
VFSHLATSLSTEHTPDDPMFSLLIVFWPMLEKLLRCEHMENGNLSTAACRALSLAIQSSG
QHFVTLLPKVLDCLSTNFVLFHGHECYIKTASVIVEEYGHHQEKFGHLFITTFERFTYAA
SVNAINSSYICDQEPDLVEAYSNFASIFLRCSHKEILAASGSLLEVSFQKAAICCTAMHR
GAALAAMSYLSCFLDVSLASMLEFASTNSEGSFNSMVIHVLSHSGEGLVSNILYALLGVS
AMSRVHKCATVLQQLAAICSVSERTDLKAVLRWESLHGWLLSAVQALPLEYLKPGEVETL
VPLWLKALGDAACDYLESKSCDELKTNYGHMQGKGGRVLKRLVREFADGHRNILNVI
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggaattgcgaatgaaagtctctcaagcagttcacgtcctaaatcatgatacccaatct
tgcaaccgcgtggcagcaaatcaatggttagtccagtttcaacagaccggtgctgcttgg
gaagttgccactgctatccttacctctgatcgtgttcaacttccgctgtcctcctttgtc
cctgatttggaagttgagttctttgctgctcagattcttaaacgcaagatccagaatgaa
ggccatctcttacaattaggagtaaaagatgctctactaaatgctcttcttgtggctgcc
aaaaagtttagttcaggccctcctcagcttttaactcagatctgtcttgcactctctgcg
cttattctgagaacagtagagcatgggaaacccattgatcgtcttttctacagtcttcag
aatctgcagagtgtggacaacggcaatttggccgttttggagatgcttactgttttacct
gaagaagttgttgacaatcaaaatgctgattgtaaaataagttcatcctgtaggagccaa
tatgcccgagagcttctattgcacactcctatggttcttgagttccttctgcagcaatct
gagaaaggatttgattgtgggacacagatgcaggaaaagaacagaaaaattcttcgatgt
ttgctgagttgggtacgtgttggttgcttctctgagatacctcagggttcattgccaacg
catccccttcttaattttgtgctcaaatccttgcaggatgcaacttcctttgatttggct
attgaagttcttgttgagcttgtgagtagacatgaggggttaccccaggtcttgctgtgc
agagtacattttctaaaggaaatgcttctttttccctctcttagtagtggagatgagaaa
gtaatcagtggtcttgcatgcttgttctcagaagttgggcaagcagcaccatccttaatt
gtcgacgccagtgctgaagctcttgctctagctgatgctctcttgagttgtgtggctttt
ccaagtgaagactgggagattgctgactcaacattgcaattctggtcttctcttgcaagc
tacattcttggctgtgatgagaataattcggcaaataggaaaaatgtggaagatgtattt
ttgtctatattttcagcactgcttgatgggcttctattacggattcaggtggttgaatct
gctttcaacgaggaaagaggaatgatagacctacctgatggtcttatccattttagaatg
aataccgttgagcttctagtggatatttgtcaaattttaaggtcttccagatttatggaa
aagctcttcttcagcggttggactaatggtaatgtaccaatcccttggaaggaagtggag
agcaagttatttgctcttaatgtggttgctgaggtagtcctacaagagggtcagagcttt
gatttctctgttatcacgcaactggtgaccatgctgtctgctagaccgtcaaatgagatt
aaaggaataatgtgccttgtttatagatccctggcagaagttgttgggtcttactttagg
tcaatatctgcttttcacactgatgccagacccttgttattatttcttgctactgggatc
acggaatctgtttcttcacatgcttgtgccttcgccctccgtaaaatttgtgaagatgca
accgctgtaatctttgaactgcaaaatttggaaattttgatttggatcggagagagtctg
gagaagttgcatttacctttggaggacgaggaagaagtagttagtgctgtaagtttgatt
cttggttcagttcctaataaagaactgaagagcaacttgttggctagactgctttcatca
agttatgaagcaattgagaaactagttgatgaagataacgcacaatctctgagacagaat
cctgctacttacacgaaaatcttaacctccgctgtgagaggcctgtataggatgggaact
gtatttagccatctagctacatctttgtcaaccgagcatactccagatgatcctatgttt
tctttgttgatagttttttggccaatgctagagaaacttctaaggtgtgaacacatggag
aatggtaatctctctacggcagcttgtcgtgcgctatctctagccatccagtcctcaggt
caacactttgttacgttgctgccaaaagtcttggattgcttatcgacaaattttgttttg
ttccatggtcatgaatgttacattaaaacagcttcagttattgttgaagaatatggccat
catcaagaaaaatttgggcatttgtttatcaccacttttgaaaggtttacttatgcagca
tccgtaaatgctattaattcgtcgtacatatgtgaccaagaacctgatttggtggaggct
tactcaaattttgcatcaatttttctccgatgctctcataaggaaatattagccgcatct
ggttctcttttggaggtttcattccagaaggctgctatatgttgcacagccatgcatcgt
ggggcagcattagcagcaatgtcatacctatcttgtttcttggatgttagtctagcatca
atgttagaatttgctagtaccaattctgagggatcattcaattctatggtaatacacgtt
ctatcccacagcggcgagggacttgtatcaaacattctatatgctttgcttggtgtgtca
gcaatgtcacgggttcataagtgtgcaacagttctgcaacagttggcagcaatttgcagt
gtcagtgaaagaacggacttgaaagctgtcctgcgctgggaatctttgcatggctggcta
ctatcagcggtgcaggctctcccacttgaatatttaaaaccaggggaagtagaaactctt
gtaccactatggttaaaggcgcttggagatgcagcctgcgactaccttgaaagtaaaagt
tgtgatgaattaaagacgaattatggacatatgcaagggaagggtggaagagtcttgaag
cgtctagttcgtgaatttgctgatggtcaccgcaatattcttaatgtgatttaa

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