Cucurbita moschata (crookneck pumpkin): 111441668 Help Entry 111441668         CDS       T05248                                  Name (RefSeq) pre-mRNA-splicing factor RSE1   KO K12830   splicing factor 3B subunit 3 Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111441668  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmos03021]     111441668    03041 Spliceosome [BR:cmos03041]     111441668    03036 Chromosome and associated proteins [BR:cmos03036]     111441668 Transcription machinery [BR:cmos03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      111441668 Spliceosome [BR:cmos03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     111441668  Complex B     111441668  Complex C    U2 SnRNP specific factors     111441668 Chromosome and associated proteins [BR:cmos03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      111441668     TFTC complex      111441668 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A MAP1B_neuraxin Motif Other DBs NCBI-GeneID:  111441668 NCBI-ProteinID:  XP_022934513 UniProt:  A0A6J1F7V8 LinkDB All DBs Position Unknown AA seq 1375 aa AA seqDB search MAVSEEECSSAKSRSSSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSI ELVVIGEDGVVQSVCEQPVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISDSGKLSFL TFCNEMHRFLPVTHIQLSNPGNSRNQVGRMLASDSSGCFIAASAYENRLALFSTSVSAGS NIVDKRITYPPDGEGDSVAPRSMQKASICGAIWSMCFISKDHGHLTQDNNAVLAVLLNRK GAILNELLLLGWNIREQTIHVLSQFLEDGPLAYEVVEVPQSYGFALLFRVGDALLMDLRD AYSPCCVYRIGLHFPPNVEQNFIEESYRVQDADDEGLFNVAACALLELRDYDPMCIDSDD SSLNTNQNLVCSWSWEPGNNRNRRMIFGMDTGELFMIEMNLDSDGLKVNQSACLYKGLPY KVLLWVEGGYLAALVEMGDGMVLKLENGRLIYANPIQNVAPILDMSVVDKHDEKQDQMFA CCGMAPEGSLRIIRNGISVESLLRTAPIYQGITGIWTIKMKLSDAYHSYLVLSFVEETRV LSVGLSFIDVTDSVGFQSDICTLACGLLDDGLLVQIHQNAVRLCLPTKVAHSEGIELSSP ARASWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQNELS CISIPEKHFTQKESNFFMNSVENSIMSTLLNGVSSDYIIVIGTHRPSVEILSFVPSIGLR VLASGTISLMNILGNAVSGCIPQDVRLVLVDRFYILTGLRNGMLLRFEWPHSTMMNSSDM PMQSPVIPFLLTSPDSFNKELRNTTILEKHEDEIPSSLQLIAIRRIGITPVFLVPLTDWL DSDIIVLSDRPWLLHSARHGLSYTSISFQPSTHVTPVCSAECPNGLLFVAESSLHLVEMV HSKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTCSSDICCVDPLSGSILSSFKL EMGETGKSMELVRNGNEQVLIVGTSLSSGPAIMPSGEAESTKGRMIVLCLEHVQNSDTGS MTFCSKAGLSSLQTSPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVVYS TTLPGMVLAICPYLDRYFLASAGNAFYVCGFPSDSFQRVKRLAVGRTRFMITSLTAHVTR IAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCS DRLEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCTVPGSDFDSSHNTI IASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTCPILGNDHNEYRSRENPIGVPKIL DGDILTQFLELTSMQQESVLSSSVGSAKPSSKSKPVSIPINQVVQLLERIHYALN NT seq 4128 nt NT seq  +upstreamnt  +downstreamnt atggcggtttcggaggaggaatgttcgtctgcgaaatcgcgatcttcgtcttccacttct agttccacgtattacttggccaagtgcgttctcagaggcagtgtcgttcttcaggttctt tacggtcacatacgctctccgagctctctcgatgtcgtctttggcaaggagacatccata gagttggtggtaataggcgaagatggggttgtacaatctgtatgtgagcagcctgtattt ggcactattaaggatatggccatcctaccatggaatgagaggtttcgcccatcatataca cagatgctgggcaaggatcttcttattgtaatttccgattctggaaagctttcatttctc acattttgcaatgaaatgcacaggtttcttcctgtgacacacattcaactttccaatcct ggaaattcaaggaatcaggtagggagaatgctggcctcagattccagtggctgctttatt gctgctagtgcatatgaaaatcgattggctttattctccacttcagtttctgctggcagt aatattgttgataagagaataacttatcctcctgatggtgaaggagattcagtggctcct cgaagcatgcagaaagccagtatatgtggtgccatatggagtatgtgctttatttcaaaa gaccatggccaccttacacaggacaacaatgctgttctagcggttcttcttaataggaaa ggagcaattttgaatgaactgcttttattgggatggaatatcagagaacaaactatacat gttctctctcagtttttagaagatggacctctggcatatgaggttgttgaagttcctcaa tcttatggatttgcacttctatttagggttggtgatgctctcttgatggatcttagagac gcttatagcccctgttgtgtctatagaataggcttacactttccacccaatgtggaacaa aattttattgaagagtcatatagagtacaagatgcagatgatgaaggactatttaatgtt gctgcatgtgctctgttggaactaagggattatgaccccatgtgcattgacagcgatgat agcagtctgaatacaaaccagaatcttgtgtgctcttggagttgggaaccgggcaataat agaaaccgtaggatgatttttggcatggatacaggggaactgttcatgatagaaatgaat ttggattccgatggcctgaaagtgaatcagtctgcttgtctttataagggtctaccatac aaggtacttttgtgggttgaaggcggatatttggctgcactagtggaaatgggggatgga atggtcttgaaattagaaaatggaaggctgatatatgcaaatcccatccagaacgttgcc ccaattttggatatgtcagttgttgacaagcatgatgagaaacaagaccaaatgtttgca tgctgtggaatggcacctgaggggtctttaagaattattcgaaatgggatcagcgtagaa agtttgttgaggacagctccgatttatcaaggtataacgggtatatggactattaaaatg aaactaagcgatgcttatcattcatatttggtcttatcatttgttgaagagaccagagtt ctatcagttggcttgagttttattgatgtcactgattcagttggtttccagtctgacatc tgtactttggcttgtggtcttttggatgatggtttattggttcaaatacatcaaaatgca gtgaggttatgtttacccaccaaggtcgcccattctgaaggcattgaattatcttctcca gctcgtgcatcttggtttccagataatattggtataagcttgggagcagttggacataat gtgattgttgtttccacttctaacccatgcttcttatttatccttggagttcgaaaggtt tcaggatatgactatgaaatatatgagaagcaatatttgagattgcagaatgaattgtca tgcatttcaattcctgaaaaacattttacccaaaaagaatcaaatttttttatgaactca gttgaaaatagcattatgtccacccttctaaatggggtgagtagtgattatattattgta ataggcacccataggccttcagtggagattttgtctttcgttccctctatagggctaagg gtcctggcttcgggaactatttcattgatgaatattttagggaatgctgttagtgggtgc attcctcaagacgtgagacttgttttagttgacaggttttatattcttacgggtctcagg aatggaatgctgcttcgttttgagtggcctcatagtactatgatgaactcatctgatatg cctatgcagagtcctgttattccctttttattaactagtcctgattcttttaacaaggaa ttgcgtaacactactattttggagaagcacgaggatgaaattccttctagtcttcaattg attgctattcggcgtatagggatcactcctgtttttctggttccgttgactgattggctg gattctgatataattgttttaagtgataggccgtggttattgcatagtgcaagacacggt ctttcatatacttccatatcatttcaaccgtctacacatgtaactcctgtgtgttctgct gaatgcccaaatggactattatttgttgcggaaagcagtctacatttggtagagatggta catagcaagagacttaatgtgcagaaattccaccttgggggcaccccaaggaaggttcta tatcacagtgagagcaaattattacttgtgatgaggactcaattgattaatgatacatgt tcatctgacatatgttgtgttgatcctcttagtgggtcaattttatcatctttcaagctt gaaatgggagagacaggaaaatccatggagttagtgaggaatggaaacgaacaagtgctt atagttggaacaagcttgtcttctggtcctgccataatgcccagtggtgaagctgaaagt accaagggtcggatgattgtcctctgccttgaacatgtgcaaaactcagataccggttca atgactttttgttcaaaggcaggattatcatctctacagacctcaccatttcgtgaaatt gttggatatgctacggaacagttatcaagcagtagtctttgtagcagtccagatgatgca agctctgatggtataaaacttgaagaaacagaagcatggcaattacgagtagtttattca actaccttgcctggaatggttcttgctatctgcccttatcttgatcgttatttcttggcg tctgctggtaatgctttttatgtatgtggtttcccaagcgatagtttccaaagagtgaaa aggcttgcagttgggaggacacgttttatgataacatctttgacggctcatgttactaga attgctgtcggtgattgtcgtgatggtattcttttcttctcttatcaagaggatgctaaa aagctggagcaaatttattctgatccttcacagaggctagttgctgattgtactcttttg gacgttgacactgctgttgtttcagatcgcaagggaagcattgctatcttatcatgttct gatcgtttagaagataatgcaagcccagaatgcaacttaacgctgaactgtgcgtattac atgggtgaaattgccatgaccttgaggaaaggttcattttcatacaaacttccagctgat gatttgttgagaggttgtactgtccctggctctgactttgattcatcacacaacactatc attgccagtacattattagggagcattgtaatcttcactcctctatcgagggatgagtat gaacttttggaagctgtccaagctaaacttgcagttcatccactaacttgcccaattctg gggaatgatcataatgagtatcgtagtcgtgaaaatccgattggagtaccgaaaatactc gatggtgacatactgactcagttcttggaacttacaagcatgcaacaggaatcggtatta tcgtcatctgttggctcagcaaagccgagctcaaagtcgaagcccgtatccatccccatc aatcaggtcgtgcaactccttgaaagaattcattatgccctcaattag

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