Cucurbita moschata (crookneck pumpkin): 111441862
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Entry
111441862 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111441862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111441862
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111441862
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
HECT type E3
111441862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TRIP12_N
HECT
Arm
ARM_PUB
Motif
Other DBs
NCBI-GeneID:
111441862
NCBI-ProteinID:
XP_022934791
UniProt:
A0A6J1F2T7
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MGNRGQKRAEMVDRLPADKRTCSSLEFRPSSSNSSVQMHVTSTNSSPGIHENDMDTSSSA
SASSRSEGEHDKDSAYGSCDSDDAEQKHSDLRNCQRQRSSSDHERFKRILSSLGEESDTS
AQILLLTDLCEVLSFCMESSLSSTTSDSLSIILVNLVKLDSNSEIVLLALRALTYLCDAY
PRASSFIVRHGGVPALCQRLGVIVYLDVAEQCLQALERISQEHPVACLESGAVMAVLTFI
DFFSSSIQRTALRTVVNICKKLPSECPQTLIEAVPILCNLFQHDDGELVENVARCMIKIA
ECAHQSCEILDGLCQHGLIQQVIRLINLNSRTSLSQTIYNDLLGILVKLSSGSIVAFKTL
YELDISNTLKEILSVYNLSHGMSSCAVVDGQRNQVCEVLKLLNELLPTEDAKAEQLSEKV
SFLASNPKQLQKFGLDILPLLVQVVSSGAKLYVCCGCLTIIYKFICLGESDMLVELLQNA
NISSFLVGVFTRKDHHVLMLALKITEIILQKLSSIFLKSFVKEGVYFAIDALITPEKYKQ
LIFPVFASVHPSFGSCQKSTRENGRCLCYAFSSGCFSSVAETGSCKLDDDSVYSLANHIR
NNYFTDELCDTDKGVSDILQNLLTFSGALDDLLNLSLIKDTPGQDEEKFYALLAEIMSKL
KCGEPISTFEFIESGIVKSFINYLTNGQYLRKKGEPQTISRQFSIMERRFEAFARLLFSS
SDHPSVNLPVRVLLRKLQISLSSLENFPVISSQGFKHRNYFATVPNGRCIPHPCVKVRFV
RGDGETDLCDITGDILTVDPFSSLNAIEGFLWPKVSRKKAEQSSEADSLREHQVKLLSNV
CSYSGVNPELVGSNSKSSDLPEIEASVEVSTDEKSLGSASSSKKGTKPKLLLYLEGKQLE
PTLTLYQTILQRHIKENEAISGTKVWSQVYTIMYKRAGEVEDNSCNQFFSGSDKGATLHF
SSFFCGILDCDLPSDLAKESPVYDVLFLLRIIEGMNRMAFHIMSHERIRAFSEGRISTLD
NIKLSVPSVSQNEFVNSKLTEKLEQQMRDFSAVSIGGMPLWCKELMDSCPFLFSFEARRK
YFRIVVFGMPQQPYVRSYSDLGTSNGVRSSSGGLPRKKALVLRDKILLSAAKMMDQYAHQ
KVLLEVEYDEEVGTGLGPTLEFYTLVSQEFQKYGLGMWRGDHDAFIPGKSLNIEGRETIE
SPFGLFPRPWLSTVDIGELQFSEVIKRFTLMGQIVAKAIQDGRVMDIYFSKAFYKLILGQ
EVSIYDIQSFDPELGTVLLEFQALVNRSKLLESVCEENSSSKLEFCYHDTNIEDLCLDFT
LPGYPDCRLTSSQDNSMVNTKNLEDYVSLVADATLYSGISTQIEAFKSGFNQVFPIEHLQ
VFTAEELERLICGEQDSWALSDLLDNIKFDHGYTASSPSIINLLEIIQDFDNEQQRAFLQ
FVTGAPRLPSGGFTSLNPKLTIVRKHSSNMVDSDLPSVMTCANYLKLPPYSSKEITKEKL
LYAITEGQGSFHLS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtggccaaaagcgtgcagaaatggtggacagattacctgctgataaacgg
acatgcagttcattggaattcagaccaagctcatctaattcatctgtgcaaatgcacgtg
acatccactaattcaagtcctggcatccatgagaatgacatggacacttcatcgtctgct
tctgcttccagtcgttcagagggagaacatgataaggattcagcctacgggtcttgtgat
tcagatgatgcagaacaaaaacatagtgatcttcgtaattgtcagaggcaaagatcatct
agtgatcacgaacgatttaaaaggattttatcaagtttgggcgaagaatctgatacatct
gcccaaatactactgctgacggatctatgtgaggttttatcattctgcatggaaagttca
ctatcgagcacgacatcagattcgttatctataattcttgtcaatctggtgaaacttgat
agcaactcagagatagtgctattggctttaagggctttaacttatttatgcgatgcatac
cccagagcatctagttttattgttcgccatggcggagttcctgccctctgtcagaggcta
ggagttattgtgtacttggatgttgctgaacagtgtctgcaagcattggaaagaatatca
caggaacacccagttgcatgcttagagagtggtgcagttatggctgtgttaacttttatt
gattttttttctagtagcatacaaaggacggctcttcgcacagtggtgaatatctgcaaa
aaacttccttccgagtgtccacaaactttaattgaggctgttcctattctatgcaatctc
tttcagcatgatgatggggagctggtagagaatgtggctcgatgcatgatcaaaatagct
gagtgtgcacatcaatcctgcgagattttggatgggctctgtcagcatggactgattcaa
caagtcattcgccttataaacttgaatagccgaacttctttgtcccagaccatttacaat
gatttgcttggtatacttgtcaaactatcttcaggatccattgttgctttcaaaactctt
tatgagctagacattagcaacactttgaaggaaatattatctgtttacaacctctcgcat
gggatgtcttcatgtgctgtagttgatgggcaacgcaaccaggtatgtgaagtcctcaaa
ttgcttaatgagcttctccctactgaagatgcaaaggcagaacaattgtctgaaaaagtg
tcatttctagccagtaatcccaagcaactgcagaagtttggcttggatatacttcctttg
ctagttcaggtggttagttctggtgcaaaattgtatgtttgttgcggctgcctaactatt
atctacaagtttatctgtctgggtgaatctgacatgcttgttgagttgcttcagaatgcc
aacatttctagtttcctggttggagtgtttactcgaaaagaccaccatgtgctgatgtta
gctttaaaaatcactgagattatcctgcaaaagctctctagtatatttttgaaatcattt
gtcaaggagggtgtctattttgcaattgatgcactgataacccccgagaagtataagcag
ttgattttcccagtgtttgctagtgtccacccatcatttggttcatgtcaaaagtctaca
agagaaaatgggagatgcttatgttatgccttttcgagtggttgtttctcctcggtggca
gaaacaggcagctgcaagcttgacgacgattcagtctatagtcttgcaaatcatataaga
aacaattattttactgacgagttgtgcgacaccgataaaggagtgagtgatattcttcaa
aatcttcttactttttctggggccctagatgatctactgaacttgtccctaatcaaggac
actccagggcaggatgaagaaaaattttatgccttattggctgagattatgtcaaagctt
aagtgtggcgagccaatatccacctttgaatttattgaaagtggaattgtcaagtcattt
ataaattacctaactaatggtcagtatctgaggaaaaagggagaaccacaaactatatct
agacaattttcaattatggaaagaagatttgaggcttttgcaaggctactattttctagt
tcagatcacccatctgtaaacttgccagttagggtattgttaaggaaattacagatctca
ctttcttctttagaaaactttcctgttatttctagccagggattcaaacataggaactat
tttgctacagttccaaacggtcggtgcataccacatccttgtgtgaaagttcggtttgtg
agaggagatggggaaacagatctctgtgacattactggggatatcctgactgttgacccc
ttttcttctttgaatgccattgaaggatttctatggcccaaagttagcagaaaaaaagct
gagcagtcctctgaagccgatagcctgagggagcatcaagttaaactactctcaaatgta
tgttcttactctggtgttaacccagaactagtggggtctaacagcaagtcttcagatttg
cctgaaattgaggcatctgtagaagtcagcactgatgagaaatcactgggttctgcatct
tccagtaagaaaggcacgaagcccaaattgttactttaccttgagggaaagcagctggag
cccaccttgacactttaccagacaattctccaacgacacatcaaagaaaatgaagcaata
tctggcacgaaagtatggagccaagtatatacaataatgtataaacgtgctggagaggtg
gaggacaacagttgtaaccaattcttttctggatccgacaaaggtgcaacgttgcatttc
tcttcatttttctgtggcattctagattgtgatctgccttctgacttggcaaaagaaagt
cctgtttatgatgttttatttcttctaaggatcatagagggtatgaacagaatggcattt
cacattatgtcacatgaaagaatccgtgctttttctgaagggagaattagtaccttggac
aatataaagctgtcagttccttcagtgtcgcagaatgaatttgtaaacagcaaactgact
gaaaaacttgaacagcagatgagggacttttctgctgtttctatcggtggcatgccttta
tggtgtaaggaacttatggattcatgccctttcttatttagttttgaggcaaggcgcaag
tactttcgcatagtagtatttggcatgccacaacagccatatgtaagatcatacagtgac
ttgggaacctcaaatggcgtacgatcaagttctggtggcttgcctcgtaagaaggcatta
gtactccgcgacaaaattctactttctgctgccaaaatgatggatcagtatgcacatcag
aaagtactcctagaagtggaatatgatgaagaagttggcactgggcttggtccaacatta
gaattctatactcttgtcagtcaagaatttcagaagtatggccttggaatgtggagaggg
gatcacgatgcatttatacctggaaagagtcttaacattgagggtagagaaactatagaa
tctccatttggacttttcccccgtccatggctatcaactgttgatatcggcgagctacaa
ttttctgaagtaattaaaaggttcacacttatgggacaaatagtggcaaaggccattcag
gatggtagggttatggatatctacttctccaaagccttctataaactaatacttgggcag
gaggtgagtatatatgatatccaatcatttgatccagagctcggaaccgttctgctagag
tttcaagctttggtcaacagaagtaaattattggaatctgtttgtgaagaaaactcatcg
tctaaacttgaattttgttatcatgataccaatattgaggatctttgccttgattttact
cttcctggttatccagattgtcgcttaacttcttctcaagataattcaatggtaaataca
aaaaatttggaggattatgtctctcttgttgcagatgctaccttatattctggaatttcg
acacaaatagaagcatttaaatctggatttaatcaggtttttcccatagaacatcttcaa
gtttttactgcagaagaactagagcgtttaatatgcggagaacaggactcttgggccttg
agtgatctccttgacaatataaagtttgaccacggatatacggccagtagcccctccatt
attaatctgcttgaaattatccaagactttgacaatgaacagcaacgggcatttctacag
ttcgtgactggggcgccaaggcttccttccggaggctttacatctctcaatccaaagttg
accattgtccgaaagcactctagcaatatggtcgattccgacttacctagcgtgatgacc
tgtgcaaactatctcaagttgcctccttactcttcaaaggagataacgaaagagaagctg
ttatatgccataacagaaggacaaggctcgtttcatctttcgtag
DBGET
integrated database retrieval system
