Cucurbita moschata (crookneck pumpkin): 111441926
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Entry
111441926 CDS
T05248
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111441926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111441926
03009 Ribosome biogenesis [BR:
cmos03009
]
111441926
04131 Membrane trafficking [BR:
cmos04131
]
111441926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111441926
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111441926
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111441926
Membrane trafficking [BR:
cmos04131
]
SNARE
SNARE associated proteins
Others
111441926
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111441926
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111441926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
RNF220
Motif
Other DBs
NCBI-GeneID:
111441926
NCBI-ProteinID:
XP_022934886
UniProt:
A0A6J1F332
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MANQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVISVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKACLRKSPISKDVELRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRKSEN
PEAMEEDADDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGAEFRFEQ
SSGSTASDPFATSAGGADEDDLYN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcaacccgaatcgtctgactccaagggtacgaagagggacttcagcaccgcc
attttggagcggaagaaggccccaaatcgacttgttgtcgatgaagctatcaatgatgat
aactcggtggtcgctcttcatcctgataccatggagaagcttcaactcttccgtggggat
acgatcctcattaagggtaagaagaggaaagacacgatctgcattgctcttgctgatgat
acatgtgatgaacctaaaataagaatgaacaaggtcgtgagaagcaatcttagggttagg
cttggtgatgttatctctgttcaccaatgtgctgatgttaaatatggaaagcgtgtacat
attcttccagtggatgatactattgaaggggttactggaaatctttttgacgcttatttg
aaaccctatttcttggaggcatatcgccctttgaggaagggtgacctctttcttgtgaga
ggggggatgaggagtgtagagttcaaggttattgagactgatcctgctgaatactgcgtg
gtagccccagacactgagatcttttgtgacggggagcctgtgaaaagggaggatgaggat
agattagatgaagttggttatgatgacgttggtggtgttaggaagcaaatggctcagatt
cgtgaactggtcgagctgccgctgaggcatccacaactatttaagtcaatcggtgtgaag
ccacccaagggaattttgttatatggaccccctgggtctgggaagactttgattgcacgt
gctgttgccaatgaaactggtgcatttttcttctgtattaatggaccagagatcatgtca
aagttagccggtgaaagtgaaagtaacctccgaaaagcttttgaggaagcagagaaaaat
gcaccatctattatctttattgatgaaattgattcgattgctcccaaacgagagaagacc
aatggggaagttgagcgaaggattgtctcgcagctactgaccctcatggatggattaaag
tctcgtgcacatgtcattgtcattggggcgacaaatcgacccaacagcatcgacccagct
ctgagacgatttggaagatttgatagggaaatagacatcggtgttcctgatgaagttggg
cgtctagaagttctacgaattcatactaaaaacatgaaactcgctgaagaagttgatttg
gagaggatttctaaagatacgcatggctatgttggggctgatctggcagctctctgtact
gaggctgctcttcaatgcattagagagaagatggatgtaattgacttggaggatgactca
atagatgctgagatactcaactcaatggcagttacaaatgagcattttcagactgctctt
ggaaccagcaacccatcagctcttcgtgaaacggttgttgaagtacctaatgtttcatgg
gaggatattggaggtcttgagaatgttaagagggagcttcaagagacggtccagtatcca
gttgaacatcctgagaaatttgagaaatttgggatgtcgccatccaaaggagttcttttc
tatggccctcctggatgtggaaagactcttctggcaaaggccattgcaaatgaatgtcaa
gcaaacttcattagcgttaagggcccagagttgctcactatgtggtttggagagagtgag
gccaatgttcgcgaaatctttgacaaggctcgccagtccgctccttgtgtcttgttcttt
gatgaactcgactcaattgctacccaaagaggtagcagtgttggggatgctggaggtgct
gctgatcgtgtactgaaccaacttcttacagaaatggatggaatgtcagcaaagaaaact
gttttcatcattggtgccaccaacagaccagacattatagatcctgctcttttacgtcct
gggcgtctcgatcagttgatttatattcctctccccgacgaagaatctcgtcttcaaatt
ttcaaggcttgcttgaggaaatctcccatttcaaaagatgttgaactcagagcccttgcc
aagtacactcaaggtttcagtggtgctgatattacagaaatctgtcagcgtgcctgcaaa
tatgctatcagagagaacatcgagaaggacatcgaaaaggagaggaggaaaagtgagaac
cctgaggccatggaggaggatgccgatgacgaagtcgccgagatcaaggctgctcacttt
gaggaatccatgaagtatgcccgaaggagtgtcagcgacgcggacatccgcaaataccag
gcatttgcacaaacacttcagcagtcgagagggtttggagccgaattcaggttcgagcag
agctcgggatcaactgcatctgacccatttgcaacctctgctggtggggctgatgaagat
gacctctataactag
DBGET
integrated database retrieval system
