Cucurbita moschata (crookneck pumpkin): 111441956
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Entry
111441956 CDS
T05248
Name
(RefSeq) ubiquitin receptor RAD23b-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111441956
09124 Replication and repair
03420 Nucleotide excision repair
111441956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmos03051
]
111441956
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111441956
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111441956
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111441956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
T2SSM_b
Dsc3_N
TECR_N
UBA_RAD5A
Ubiquitin_4
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
111441956
NCBI-ProteinID:
XP_022934930
UniProt:
A0A6J1F959
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MKLTVKTLKGSHFQIEVQPTDTVLGVKKNIEDAQGTDSYPCGQQLLIHNGKVLKDETTLS
ENKVTEDGFLVVMLSKSKAPGSTGSSSTQTTTNVPTTTPTPNSTLIPEAPAQPAASRNVA
TSDVPTANTQVDTYGQAASNLVSGNNLEQTIQEIMDMGGGNWDRETVTRALRAAYNNPER
AVDYLYSGIPEAAEIAAPVARPPSSQPIETGGVTAPTSGGPNSSPLNMFPQESLAAAAAA
AGGGGSLGSLEFLRNNPQFQALRSMVQANPQILQAMLQELGKQNPQLLRLIQDHQAEFLQ
LINEPLEGFEGDLFDQPEQDMPHAINVTPAEQQAIERLEALGFDRDQVIEAFLACDRNEE
LAANYLLEHGGEFED
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttacggttaagaccctgaaagggagtcacttccaaattgaggttcagcctaca
gacaccgttttgggtgtaaagaagaacattgaagatgcacaaggaacagatagttatcct
tgtggtcagcaactgttaatccacaatgggaaggttctaaaagatgaaacaacgctgtca
gagaacaaggttactgaagatggttttctggttgtcatgcttagtaagagtaaagcacct
ggttcaactgggtcatcgtctactcagacgactaccaatgtacctacaactactccaaca
ccaaattctactttgattcctgaagctcccgcacaaccagcagcctcgaggaatgttgct
acttcagatgtgccaactgcaaatactcaagttgatacatacggacaagctgcttcaaat
ttagtttctggaaacaatcttgagcagactattcaagaaataatggatatgggtggtggt
aactgggatagagaaacagttactcgtgcgcttcgagcagcctataataatcctgagcgg
gcagtagattatttgtactccggtattccagaagctgcagaaattgcagcccctgtggcc
cgtcctccgtctagccaacctatagaaacaggtggtgtgactgctcctacttctggaggt
cccaattcatctcccttgaatatgttcccacaggagtcccttgctgctgccgctgccgct
gctggtggtggaggtagccttggatcccttgagttccttcgaaacaacccacagtttcaa
gcattgcggtctatggtgcaagcaaatccacaaatattacaggcaatgcttcaggaactt
gggaagcagaatcctcagcttttgagattaatccaggatcatcaagcagagtttctccag
ttaataaatgagcctcttgaaggcttcgaaggggatctgtttgatcagcctgagcaagac
atgcctcatgctatcaatgtcacaccagctgagcagcaagcaattgaacgactcgaagca
ttggggttcgatagggatcaagtcattgaggcatttttagcttgtgaccgaaacgaggaa
ttggctgccaactatctcttggaacatggtggcgaatttgaggattaa
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integrated database retrieval system
