Cucurbita moschata (crookneck pumpkin): 111442006
Help
Entry
111442006 CDS
T05248
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020
RNA polymerase
cmos03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111442006
09124 Replication and repair
03420 Nucleotide excision repair
111442006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111442006
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111442006
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111442006
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111442006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
111442006
NCBI-ProteinID:
XP_022935017
UniProt:
A0A6J1F4E5
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFIIEREEHTIGNILRMQLHRDENVLFAG
YKLPHPLKYKIIIRIHTASQSSPMQAYNQAINDLDKELDHLKNALEAEFAKFSRDY
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccccgaccgatatgagcgtttcgtcgttccagaggggactaaaaaggtctca
tacgaaagagacaccaagattataaatgcggcgtcgtttatcattgaaagggaggaacat
acaattggaaacatcttgcgaatgcagcttcacagagatgaaaatgtgttgtttgctgga
tataagcttcctcaccctttgaagtataaaatcattatccggatccatactgctagccaa
tcgtcgccgatgcaagcatataatcaagccatcaacgatttggataaggagcttgatcac
ttgaaaaacgcacttgaggctgagttcgcaaagttctcaagggactattga
DBGET
integrated database retrieval system
