Cucurbita moschata (crookneck pumpkin): 111442757
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Entry
111442757 CDS
T05248
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111442757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111442757
03036 Chromosome and associated proteins [BR:
cmos03036
]
111442757
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111442757
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111442757
PBAF complex
111442757
GBAF(ncBAF) complex
111442757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
111442757
NCBI-ProteinID:
XP_022936036
UniProt:
A0A6J1F6D7
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAANLPVQDPPTDASAKHPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPAPTPRPEDLPQ
SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNAIVKNFRECP
SKKITFTEVRKTLVADVGSIRRVFDFLEAWGLVNYSPSALNKPLKWEDRDSKSNSSASHT
GEPGGSSADSAAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD
FRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQ
FLGYPDSGNVGGRTVVKDHASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVG
VEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDA
NSQIEKEEVAVEKAISHILDVQIKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLN
LLFRKGCIPTIEDKNSKNLSTY
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaatttaccggtccaagatccccccacggatgcttctgccaaacatcctacg
ccttcgccttcccccactcttgtaacccctcccgttaagatcgacactccttcatccgac
tccggcaagacccccgccgccgttcccgctcccacccctcgccccgaggacctccctcaa
tccgcctctcccgatccagttcatcttcccagctactccagatggttctcctggaacggc
attcacgagtgcgaggttcggttccttccggagttcttcgattcacggtcgccctctaaa
aaccctagggtttacaagtaccttcgaaatgctattgtcaagaatttcagagaatgccct
tccaagaagatcacatttactgaggtccgaaagacgctcgttgccgatgtaggatctatt
cgtagggttttcgattttctcgaggcttggggtctcgtcaattactcgccgtccgccctg
aacaaaccgctcaagtgggaggaccgggactcgaagtctaattcgtccgcttcgcacacc
ggtgaacctggaggtagttccgcagattccgcagctcctaaagacgcttctaagagagta
tgcagcggttgcaagtctatttgtagcatcgcttgctttgcatgcgataagtttgatttg
accctttgtgcgaggtgctatgttcgtggaaactatcgagttggtgttagttcttcagat
tttcgacgtgttgagatcaatgatgagacacgaacagattggactgataaggagactttg
catcttcttgaagctttgacgcatcatggtgatgattggaaaaaggtcgcacaacatgtt
ggtggcagaactgaaagggaatgtgttgcccattttgtgaagcttcctttgggggagcag
tttcttggttatccagattccggaaatgttggtggcagaactgtagtgaaagatcatgcc
agtgccgatcttacattagaaagcacacctcttactagtaaaagaatccgtctatctcct
ctggcagatgcaagtaatcccataatggctcaggctgcctttttgtcatctttggtgggt
gttgaggtagcagaagcagctgcccatgcagctgtggttaaactttctgatatgggcttt
ggaggagatggggaaattgccacagctgtcgctaggaatataggagaccaaggaaacgac
gttgtatcctgtggaggcagcactgctaggagctcatttagtgtgtcttcggtggatgca
aactcacagattgagaaagaagaggtggctgtggagaaagcaatatctcatatactagac
gtccaaatcaaagaggctgtagataagcttgatcgtctggaggaggtagacttgcagatg
gagaaggaatttaagcaattagaccaaatgaaaagcatgctttttgttgatcaactgaat
ctcttattccgcaaaggatgtatccctaccatcgaagacaagaacagtaagaatctaagt
acttattga
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