Cucurbita moschata (crookneck pumpkin): 111442760
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Entry
111442760 CDS
T05248
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111442760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111442760
03036 Chromosome and associated proteins [BR:
cmos03036
]
111442760
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111442760
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111442760
PBAF complex
111442760
GBAF(ncBAF) complex
111442760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
RecO_C
Motif
Other DBs
NCBI-GeneID:
111442760
NCBI-ProteinID:
XP_022936039
UniProt:
A0A6J1F755
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEEDEDEDLAAAENEEMER
DNNDDSEDPQINLQSAPNSSLQEPELLSDDKVRVSEFPQVVKRVVTRPHSSVLAVVAMER
ANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIME
GRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPERYMEIRNFVVA
KYMENPEKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLRE
DMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVYSILPCHDDNDDLCDLDNKIRERLAE
NYCSSCSQPVPIAYYQSQKEVDVLLCSNCFYEGKYVAGHASIDFLRVDMTKDYDELDSEN
WTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENIDVPGVSLS
SNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGPRVA
ASCAHASLAALSEDSVASSGSIFQREGSVNANRTNVDITHGRDSGSYGELPNSVEQKDEN
KAEPEVTQLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLRRLELKLK
QFAEVETFLMKECEQVERTRQRLVAERARMLGIQFGTAAGVSSPASLPGVIPSMVNNNNT
NSRQNMISPPASQPSVSGYNNNQPLHPHMSYMPRQSMFGLGQRLPLSAIQQQQQQQQQPA
TTSSNAMFNGPTNAQPSLSHPMMRPVTGSSSGLG
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcattcccatctgggtctcgtggaaaatggaggaagaagaagagg
gattcgcaaattggccgcagaaacaacttccctaatagtaataacaacggcagcaacaag
catgaggaggaagatgaagatgaagaccttgccgcggctgaaaatgaagaaatggaacgc
gataacaacgatgattctgaggatcctcagattaaccttcaatccgcgcccaattcgagc
ctacaggagcctgaactcctgtcggatgataaagtgcgagtctccgagtttcctcaggtc
gttaagcgggttgtcactcggcctcactcttctgtgttggccgttgtggcaatggagagg
gcaaatcagttcggagaaagtaaggggctgcctggaaattcattgattttggagaatgtg
tcttatgggcagctccaagccctgtctgctatgcctgcggatagtccggcgttgctggat
caggagagggtggaggctggcaacgccgcctatgtaataacgcctccaccgattatggag
gggcgtggcgtggttaagaggtttgggagtagggtacatgttgtccctatgcactcagat
tggttttcacctgccacagtgcatcgacttgagagacaagttgttccacattttttctct
ggaaaatttcctgaccgcactcccgaaaggtatatggaaattcgaaattttgttgttgcg
aaatacatggagaatcctgagaaaagggtcacagtttcagacttccaaggattgattgat
ggtgtcagtaatgaagatttaactcggattgttcgatttcttgatcattggggtattatt
aattattgtgctcctgcacctagctgtgaaccatggaatagtagttcatacttgagagaa
gatatgaacggtgagattcatgtgccatcagctgctttgaagcctatcgatagcttgatc
aaatttgacaaaccaaaatgtaggctcaaggcaaatgaggtctattcaatacttccttgc
catgatgataatgatgatttgtgtgatttggataacaaaattcgtgagcgtctagctgaa
aattattgtagctcttgttctcagcctgttcccattgcatactaccaatcacagaaggag
gttgatgttttactttgctccaactgcttctatgaaggcaaatatgttgctggtcatgca
agtattgattttctgagggtagacatgacgaaagattatgatgaactagatagtgaaaat
tggactgatcaagaaactctattgcttttagaggcaatagaattgtataatgataactgg
aacgaaattacagaacatgttgggtccaagtctaaagctcaatgcattatacattttctt
cgtctatcagtggaggatggccttctagaaaacattgacgtgcctggtgtttctctctcg
tccaattcttcacatggagaagataatgagaagtcgcattcaaatatgaacggaaatgta
gcaggttcttcctctcaagataataaagagatgcgtgataggctcccgtttgctaattct
cagaacccagtcatggcgttggttgcttttctcgcatctgctgttggaccaagagttgct
gcatcatgtgctcatgcatccttagctgctttatctgaggacagtgtagcttcttccggg
agcatctttcaaagggagggttctgtaaacgccaataggacgaacgtcgacatcacacat
ggcagagacagtggctcttatggagaacttccaaattcagttgaacaaaaagatgagaac
aaggctgagcctgaggtaacacaattatcttctgaacgagttaaagttgcagcaaaagca
ggcctggctgctgctgcaacgaaggcgaaattgtttgctgatcacgaagaacgagaaatc
caacgtttgtctgccaatattataaatcaccagttaagaagactggagctgaagctgaag
caatttgcagaagtagaaaccttcttaatgaaggaatgcgaacaagttgagaggacaagg
cagaggcttgttgcagagcgagcaagaatgttaggtatccaattcggaactgctgctgga
gtttcgtcacctgcaagtttaccgggcgttatcccttccatggtcaacaacaataacaca
aacagtaggcagaatatgatctcacctccagcttcacagccgagcgtttcggggtataac
aacaaccaaccacttcacccccacatgtcgtacatgccccgacagtcgatgttcggttta
gggcaaaggctacccttatcggcaattcagcagcagcagcagcagcagcagcagcccgcc
acgacttcttctaatgccatgttcaatggtccaaccaatgcacagccttctcttagtcac
ccaatgatgaggccagttactggatccagctctggattagggtga
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integrated database retrieval system
