Cucurbita moschata (crookneck pumpkin): 111442884
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Entry
111442884 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111442884 isoform X1
KO
K19027
zinc finger FYVE domain-containing protein 26
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
111442884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111442884
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111442884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZFYVE26
TPR_2
DUF764
Motif
Other DBs
NCBI-GeneID:
111442884
NCBI-ProteinID:
XP_022936210
UniProt:
A0A6J1FD00
LinkDB
All DBs
Position
Unknown
AA seq
2541 aa
AA seq
DB search
MEDKETEILSRLAANHLFLGQFEPLRATIVALRVRNPELALSILQTIVYRSGRFDNVTWS
PSCSSPSLLTYLATLELIQFDKATSIWGFDHETLRLRAEFLLLVQNLIDRIVGSTRKMLE
LESVNKEGGEEEVSTSNETVEERADLLRVEEGKPEDVPSEIGDCVQVLDKVLELGVKRLK
VEGANVEVDDRQSDASPATVGSVNEEELTCLSRVIGDHADAFDALCSNIQRQVGSSQSYG
PSLAITVRSNNDGNVGLNDEEDVKCFSSIQRCVQTTHLDHLKECLKNADVDGAISRIRFL
HVERGLDESEYRKVFQDLLKIILAQKEACEGDYDVMGGRLLSVYEEALSSNSRHLIEMIQ
IIQDEVLAEEIEMHKGPDNNQIPLPIQRFLSNIMELKPEMNLDEKTACLTKAIFSCTRDL
YHYARVSGSHVLECIMDAALSAVKRTELEEANHVLLLFPRLRPLVAAMGWDLLSGQLKER
RELMQLLWISKSPALLQDASSEVKSQLEDISCVEHLCDTLCYHLDLAAFVACVNSGRSWS
SKFSLLQSGKGQTVGSRVDTNSDLFVENFVLERLSVQSPLRVLFDVVPGIRFEDALELIN
MQPISSSIAAERRIQDIELMHVRYALESAVLALGAMEKGMTAERDYHQVAFCHLNDLSKH
LESIDNIARKVLMVSIIISLLHMNDLSLNMTHCNSPGSPSSSLYSYLSEQPDFTAFEGRN
KMVISFITVLFDILHRSLPSDVIQDDDLSNYGARMGGRKALEWRVSIATRFIEEWEWRLS
ILQHLLPLSERQWRWKEALTILRAAPSKLLNLCMQKAKYDLGEEAVHRFSLSAEDKATLE
LAEWVDNAIRRVSMEDVMSRAADGISAVQEIDFSSLRSQIGPLPVILLCIDIATTSVRSK
KISLQLLDQAQTMLSEIYPGASPKSGSNYWDQILEVGIISVSRRILKRLHESLEQENSPC
LQAIMSGEIIISSAEDSQRQGQRERALGMLHQMIEDAHQGKRQFLSGKLHNLARAVTDEL
EHHFLKSGENQSANRKIISNLNKDGVLGLGLRAVNQAHSSSLAGDASMQSVGYDVKEAEK
MLFGPLSTKPSTYLSQFILHIAAVGDIVDGTDTTHDFNYFSLVYEWPKDLITRLVFDRGS
TDAAGKVAEIMNADFVHEVISACVPPVYPPRSGCGWACIPVVPSCSKGSSENRLLSPSTK
EAKLRCARSSLAMIGIPLHPLQLDIVKHLVKISPVRAILACVFGSSILHSSSIPMSSSST
DSLQQAPDADRLFLEFALDQSESRFPTLNRWIQLQTNLHRVSEFAITAKQDADDVCFKPD
TRASMKRLLEHDSDTESEFDEIVSSSKTSVPLPGINVQDGTFQDGWCHSSKSDIDELDTT
TFLSFDWENEEPYQKAVERLIDDGQLMDALAISDRFLRNGASDRLLKLLVEHEEERDSIF
RQSQHHGNSGTWSNSWQYCLRLKDKQLAATLALKYMHRWELDAALNVLTMCSCHLPQSDP
LRNQVMQFRQALQKYGHILSADDHFSSWQEVEAECKEDPEGLALRLAGKGAVFAALEVAE
SAGLSIDLRRELQGRQLVKLLTADPLNGGGPAEASRFLSSLRDSDDALPVAMGAMQLLPN
LRSKQLLVHFFLKRREGNLSEVEVSRLNSWALGLRVLAALPLPWQQRCSSLHEHPHLILE
VLLMRKQLQSASLIIKEFPSLRDNNVIITYATKAIVVNINSPPREHRVSISATRPKPKPK
SGVSARSSFTTSLSNFQKEARRAFSWAPRNNTGEKAAPKESYRKRKSSGLAPSERVAWEA
MTGIQEDRVLSYPTDGQERLPSVSISEEWMLTGDTEKDEVVRGSHRYESAPDFTLFKALL
SLCSDELTSAKSAMDLCINQMKNVLSSQHLPENASMEIIGRAYHATETIVQGLLYAKSLL
RKLVGGTELPSNSEKSRDLDDTSSDAGCSSLGSQSTDELSEAHSQADTWLVRAQLLQSLL
GSGIAASLDDIADVESSARLRDRLILDERYSMAVYTCKKCKIDVFPVWNAWGHALIRMEH
YVQARVKFKQAFQLYKGDSVTFVQDIINTIEGGPPVEVATVRSMYEHLAKSAPTILDDSL
SADSYLNVLHMPSTFPRSERYRWILESANDSSHLEYDDGPRSNLDSVRFTECVSYMQEYA
RQLLLGFMFKHGHYRDACMLFFPQDSVPAPPQPSSVGTVTSSSSPQRSDPLATDYGTIDD
LCDLCIGYGAMSVLEEVISLKLSSTKPEDGAMNQYMATALARTCNFCEMHRHFNYLYVFQ
VLKQDHVAAGLCCIQLFMNSYSPEEAVKHLEHAKMHFDEALSARHKGGDSTKPMVKGVRV
RSASEKLSEEGLVRFSARISIQVEVVKSFNDSDGPQWKHSLFGNPNDPETFRRRCKIAET
LVEKNFDLAFQIIYQFGLPAVDIYAGVAASLAERKKGGQLTEFFRNIKGTIEDGDWDQVL
GAAINVYANKHKERPDRLIDMLTSSHRKVLACVVCGRLKSAFQIASRSGSVADVQYVAHQ
ALHANALPVLDMCKQWLAQYM
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaagaaactgaaattctgtcacgattggctgcaaatcatctctttcttggc
cagtttgagcctctccgtgccactattgttgctcttagagttaggaatcccgaactcgct
ctttctatactccagacgatcgtatatcgatctggtcgattcgacaatgtcacttggtcg
ccctcttgttcgtcgccgtctttgttaacgtacttagcgacccttgaattgattcagttc
gataaagctacgtcgatatgggggttcgaccacgaaacgctgcggttacgagcggaattc
ttgttattagtccagaatttaatcgaccggatagtgggaagcacgaggaagatgctcgaa
ttggagagcgtaaacaaagaaggaggagaagaagaagtttcgacctcaaacgaaactgtc
gaggaacgggctgatttgttgcgtgtcgaagagggaaagccggaagatgtgccgtcggaa
atcggtgattgcgtgcaggttttggataaggttttggaattgggagtgaagagattgaag
gtagaaggtgccaatgtcgaagttgacgataggcagagcgacgctagtcccgcgacggtg
ggatcggttaatgaagaagaattaacgtgtttgagcagagtaattggagatcatgcagac
gcttttgatgctttgtgttcgaatattcaaagacaggttgggagttctcagagttatggc
ccaagtttggcaataacagtgcggagtaacaacgatggaaatgtgggattgaacgatgag
gaagacgtcaagtgtttttcttcaatacaaagatgcgttcagacaacccatttggaccat
ttgaaggagtgcctgaagaatgcggatgtagatggtgcaatttctcgcattcgttttctt
cacgttgagcgtggattggacgaatctgagtaccgcaaggttttccaagaccttctgaag
attattttggcgcaaaaggaggcatgtgaaggcgactacgatgttatgggaggaagactg
ctttcagtttacgaagaagcgctttcatcaaattccagacacctcattgaaatgatacaa
attattcaagatgaggtgttagctgaagagattgagatgcataaagggcccgataacaat
caaattccactcccaatacaacgctttctaagtaatataatggaattaaaacctgaaatg
aacttggacgagaagacagcatgcctaacaaaagcaatattttcttgcacgagagacttg
taccattatgctcgtgtttctggatcacatgtgctggaatgtataatggatgctgctctc
tctgcagtgaagaggacagagcttgaagaagctaaccatgttctcttattgtttcctcgc
cttcggcctttggtagctgctatgggttgggatttactgtcgggtcaattaaaagaacga
agggagttgatgcaactactgtggatcagtaagtcacctgccttgctgcaggatgcatct
tctgaggttaaaagtcagttagaagatatatcttgtgtggaacatctttgtgacacttta
tgttaccatcttgatcttgctgcatttgttgcatgtgtcaactctggtcgatcatggagc
tcaaaattctcattattgcaatctggaaaagggcagacggttggtagcagagtagatact
aattcagacctttttgttgagaactttgtattagaaaggctctctgttcagagtcctctt
cgggttttgtttgatgttgttccaggcatcagatttgaggatgcgcttgagctgattaat
atgcagccaatttcttctagcattgctgcagaaaggaggatccaagatattgaacttatg
cacgtgcgttatgccctagaatcagctgttcttgcactaggagcaatggaaaagggcatg
actgctgaaagagattatcatcaagttgcattctgccatttgaatgatctttccaagcat
ttggagtccatagataatattgcacgaaaggtactcatggtgagcatcattatttcactt
ttgcatatgaatgatctgtccctcaatatgacacattgcaattcacctgggagcccttcc
tcatcactctattcctatctgtcggaacaacctgatttcacagcatttgaagggagaaat
aaaatggttatatctttcataacagtgctatttgatatattgcatcgtagtcttccatca
gatgtgatccaagatgatgatctatctaactatggtgcccgtatgggtggaagaaaggct
ttggaatggagagtttccattgctacacgtttcattgaagagtgggaatggcgattgtca
atcttgcagcatctgctaccattatctgagcgccagtggagatggaaagaagcgttgact
attctgcgtgcagctccctccaaactgcttaacctatgtatgcagaaagcaaaatatgat
ttaggagaggaggcagttcatagattttcattatcagcagaagataaagccacgcttgaa
ctagctgagtgggttgataatgctatcagacgagtatccatggaagatgtcatgtcccgt
gctgctgatgggatttctgctgtacaagagattgatttttcctcattacgttcacaaata
ggtcccttgcctgtaattcttctatgtattgacattgccacaacttctgtacgaagtaag
aagatatccttgcagcttcttgatcaggctcaaactatgctatctgagatatatccagga
gcgtctccaaagtctgggtccaattattgggatcagatccttgaagtgggaattatctct
gtttcaaggcgtattctcaagcgtttgcatgagtccttggaacaggaaaattctccatgc
cttcaggctattatgtccggtgaaattattatttcttcagcagaggactcacaacgtcaa
gggcaaagggaacgtgctcttggtatgctacatcaaatgattgaagatgcccaccaagga
aagcgacaatttctgagtggtaagcttcataatttggcaagagctgttactgatgaactg
gaacaccattttctcaaaagtggggaaaaccagtctgccaatcggaagattatttctaat
ttgaacaaggatggggttcttggtcttgggcttagagctgtaaatcaggcacattcgagt
tccttagctggagatgccagcatgcaatcagttggttatgatgtgaaagaagctgagaag
atgctatttggtccgttaagtaccaaaccctcgacatatctatcacagttcattctccat
attgctgcagttggtgacattgtggatggaactgatacaactcatgatttcaactatttc
tcacttgtgtatgagtggcctaaagatcttataactcgacttgtttttgatcgaggaagc
actgacgcagctggtaaagtcgctgaaataatgaatgcagattttgttcatgaagtgatt
tcagcatgtgtgcctcctgtttatcccccacgatctggttgtggatgggcatgtattcca
gttgttccatcttgttcaaaaggtagttctgagaatagactactctcaccttcaacaaag
gaggccaagttaagatgcgctagaagttcattggctatgattggaattcctcttcatcct
ttacagttggatattgtaaaacatttggttaaaatatctccagtaagggctatcttggca
tgcgtctttggaagtagtatattacacagtagtagcatccctatgtcaagctcctcaact
gacagcttacagcaggcgcctgatgctgacagactctttcttgagtttgctcttgatcaa
tctgagagtaggttcccaactttaaaccggtggatacaattgcaaaccaatctccatcgc
gtttcagaatttgctataacagcaaaacaggatgctgatgatgtttgttttaagcctgac
acaagggcgtccatgaagagacttcttgagcatgacagtgatactgagtctgagtttgat
gaaatcgtcagtagcagtaaaacttcagtgcctttaccgggtataaatgttcaggatggt
acatttcaagatggttggtgccattcctcaaaatccgatattgatgaacttgatacaaca
actttcctatcgtttgattgggagaatgaagaaccctatcagaaagctgtcgagcgctta
atcgatgatggccagttaatggatgctcttgctatttctgatcgatttctacgtaatgga
gcctctgatcgattgcttaaactgctggttgaacatgaggaagaaagagattcaattttt
agacaatctcaacatcatggaaactctggtacctggagtaatagttggcagtattgtcta
cggttgaaggataaacaattagcggctacacttgcccttaagtatatgcataggtgggaa
ctggatgctgctttgaatgttcttactatgtgcagctgccacctgcctcaatctgatcca
cttagaaatcaagtcatgcaattcagacaagctttgcagaaatatggccatatattaagt
gctgatgatcactttagcagctggcaagaggttgaagcagagtgtaaggaggatcctgag
ggcttggctcttagattagctgggaaaggagctgtttttgctgctttagaggtagctgaa
agtgctggactatcaatagatttacgccgagagctacagggaaggcaacttgtgaagctt
ttgactgctgacccactcaatggtggaggtcctgcggaagcttcacgctttctttcttca
ctacgtgattcagatgatgcattgcctgtggctatgggtgcaatgcaattactaccaaat
cttcgttcaaagcagcttctggttcactttttcctgaagcgtagagaaggaaatctgtcc
gaagttgaggtatctcgtcttaactcctgggccttaggtcttcgtgtgttggctgctttg
ccactgccatggcagcaaagatgttcttcgttacatgagcatcctcatttgatactggag
gttttgctgatgaggaagcaactgcaatctgcttctttgattataaaagagtttccttcc
ttgagagacaacaatgtcatcattacctatgctactaaagctattgttgtcaatatcaac
tctccacctagagaacatcgcgtatccatctcagcaacaagacctaaaccaaaaccaaaa
tcaggagtgtctgcaaggtcctccttcactacaagcctaagtaattttcagaaagaggct
cgtagagcattttcatgggctcctcgaaataatactggggagaaggctgctccaaaagag
agttacagaaaaagaaagagttctggacttgcaccgtctgaaagagttgcttgggaggca
atgactggaattcaagaggatcgggtattatcatatcccactgatggtcaagaaagactt
ccttctgtttcaatttctgaggagtggatgctaacaggcgatactgaaaaggatgaagtt
gttcgtggatctcacagatatgaaagtgcccctgactttactctttttaaggcgttgctt
tctctttgttctgatgagctaacatctgccaaaagtgccatggacttgtgtatcaaccag
atgaagaatgtgttgagctctcagcatttgcctgagaatgcatcaatggaaataattggt
cgtgcatatcatgctacagagacaattgtacaggggctactctatgctaaatccttgttg
agaaagcttgttggtggtactgaattaccaagtaattctgaaaaaagtagggatcttgat
gacacgtcttcagatgctggctgctctagtttgggtagtcagtcaacagacgagctttct
gaggctcattctcaggctgacacttggctagttcgtgctcagctacttcaaagcctcttg
gggtcaggaattgctgcatctcttgacgatattgctgatgtggagtcatctgctcgtctc
cgtgataggttgatcctggatgagagatatagcatggctgtatatacatgcaaaaagtgc
aagattgatgttttccctgtttggaatgcatggggccatgctttgatacggatggaacac
tatgtgcaagcacgtgtgaaattcaagcaagcttttcagttgtacaagggggattccgtg
acttttgtacaagacattatcaatacaattgaaggaggccctcctgtggaggttgctact
gttcgatccatgtacgagcatttggctaaaagtgccccaacgatattagatgattcactt
tctgcagattcttatctcaatgttctacatatgccatcaacttttcctcggtcagaaaga
taccgatggattctagagtctgcaaatgatagttcacatttagagtatgacgatggacct
cgtagtaatttggacagcgttcggtttactgaatgtgttagttacatgcaagaatatgca
cgtcaactgttgcttggatttatgtttaagcatggacattacagagacgcctgcatgctg
tttttccctcaagattctgttcctgcgccacctcaaccctcaagtgtgggaactgtcacc
tcatcatcttcaccccaaagatctgatccattagcaaccgactatgggaccattgatgat
ctctgtgatctttgtattggttatggtgctatgtctgttcttgaggaggtgatctcatta
aaattatcatctactaaaccggaggatggagcaatgaatcagtatatggcaaccgcactt
gctcgtacttgtaacttctgtgaaatgcacaggcattttaattatttatacgtgtttcag
gtattgaaacaggatcatgttgctgctggtctttgctgtatccagttgtttatgaattct
tactcaccagaggaagcagtcaagcatttagaacatgcaaagatgcactttgatgaggca
ctatcagcccgacataaaggtggagattctaccaagcctatggtaaagggagttagagtg
agaagtgcctctgagaagctttctgaagaaggacttgtcaggttttctgccaggatttca
atccaagtggaagttgtgaagtcattcaatgattcagatggacctcaatggaaacactca
ctctttggaaatccaaatgatcctgaaacattcaggagaaggtgtaagatcgccgagacg
cttgtggagaaaaactttgacttggcctttcagattatatatcaatttggtcttccagcc
gttgatatatatgctggtgttgctgcatcgcttgctgagaggaagaaaggcggtcagttg
acggagttcttcagaaatattaagggcaccattgaagatggcgattgggaccaggtcttg
ggagctgcaataaatgtatatgctaacaaacacaaggagcgaccagaccgtctcatagat
atgttgactagcagtcacagaaaagttttggcttgtgtggtctgtggtcgtctgaaaagt
gctttccaaattgcttctagaagtggaagtgttgctgatgttcagtatgtagctcatcag
gcattgcacgcaaacgccctccccgtgctcgatatgtgcaagcaatggttggctcaatac
atgtaa
DBGET
integrated database retrieval system
