Cucurbita moschata (crookneck pumpkin): 111443516
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Entry
111443516 CDS
T05248
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111443516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111443516
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111443516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
111443516
NCBI-ProteinID:
XP_022937123
UniProt:
A0A6J1FF56
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MLSVAIEDEEKWLAEGIAGIQHNAFYMHQAVDANNLREALKYSALMLSELRTSKLSPHRY
YELYMRAFDELRMLEIFFKDESRHGVTVVDLYELVQHAGNILPRLYLLCTVGSVYMKSKE
VPAKEILKDLVEMCRGVQHPLRGLFLRNYLAQVSRDILLDINSECEGDADTVMEAVEFVL
QNFTEMNKLWVRIQLQGPARLREKQEKERSELRDLVGKNLHVLSQIEGVDLEMYKQTVLP
RVLEQVVNCKDELSQYYLMDCIIQVFPDEYHLQTLETLLGVCPQLQATVDIRMVLSQLMD
RLSNYAVSNADVIPEFLHVEAFAKLSNAIGKVIEAQVDMPIVGAITLYVSLLSFTLRVHP
DRLDYVDQILGACVKKLSSQPKLEDTRATKQIVVLLSAPLEKYNDIVTALTLSNYPRVMD
HLDNATNKVMAMVIIQSIMKNNSCISTADKVDVLFELIKGLIKDLEEVTVDELDEEDFKE
EQNSVARLLHMLHNDDPVEMLEIICAVKKHILCGGPNRLPFTVPPLIFSALNLIRRLQNQ
NGDVVEEMHATPKKIFQILNQLIEALSSVPAPELALRLYLECAEAANDCDLEPVAYEFFT
QAFIIYEEDISDSKAQVTAIHLIIGTLQRMNVFGIENRDTLTHKATGYSAKLLKKPDQCR
AVYACSHLFWVDDPEGIKDGERVLLCLKRALRIANAAQQMATVTRGSSGPVTLFVEILNK
YLYYFEKGNQQITTAAIQGLIELITTELQSDLPSAGPSSDAFFTSTLRYIQFQKQKGGVM
GERYDSIKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttatcggttgcaattgaagacgaagagaaatggctggcggaaggaatcgctggaatt
caacacaatgccttctacatgcatcaagccgtggacgcgaacaatctcagagaagccctc
aaatactcggctctgatgctttcggagcttcgaacttcgaagctttcaccacatagatat
tacgaactctatatgcgagcctttgacgaattgaggatgttggagatattttttaaggac
gaaagtaggcatggcgtaacggtcgtcgatctgtacgaactcgtgcaacacgccgggaat
atattgcccagactgtatctcctttgtacggttggctcagtctacatgaaatctaaggag
gtcccggcgaaggagatcctcaaagatctcgtggaaatgtgtcgtggagttcaacatcca
ttacgtggtctctttcttagaaactatctagcacaagtcagtagggacatattgctagat
attaattctgagtgcgaaggcgatgctgacactgtcatggaggccgtagaatttgtgcta
caaaattttactgaaatgaataaactttgggtgcgaattcagcttcagggacctgctcgg
ttgagagagaagcaggaaaaagagagaagcgaacttcgtgatcttgttggaaagaatctc
catgttctcagtcagatagagggtgtggaccttgaaatgtacaagcagactgttcttcct
agagtcttggagcaggtggtcaactgcaaagatgagttatctcagtactatctgatggat
tgtattattcaggtgtttccagatgaataccatttacagacgcttgagacattgttgggt
gtttgcccgcagcttcaggcaactgttgacatcaggatggttctttctcaattaatggat
agactatcaaactatgctgtttcaaatgcagacgtaatacctgaatttctgcatgtagaa
gccttcgctaagttgagcaatgctattgggaaggtaatagaagcacaggttgacatgcct
attgttggagctataacattgtatgtctctcttctgtcatttacccttcgtgttcatccg
gatcggcttgattatgtggaccaaatattgggagcgtgcgttaaaaaactctccagccaa
ccaaagcttgaagataccagagcaacaaagcaaatagttgtgcttctcagtgctccatta
gagaaatataatgatattgtgacagctcttacactctcaaattatcctcgtgtcatggac
cacctggacaatgccacaaacaaagttatggccatggtcattattcaaagtataatgaaa
aataactcttgcatttctactgctgataaggttgacgtgttgtttgaactaataaaaggg
cttatcaaggacttggaagaagttactgtcgatgagcttgacgaagaggatttcaaggaa
gagcaaaattctgttgcccgcctcctacacatgctacataacgatgacccagtggaaatg
ttagagattatctgtgccgtgaagaagcacatattgtgtggaggaccaaatcgcctgcct
ttcactgttcctcccctgatattttctgccctcaatttaattagacggttacaaaatcaa
aatggggatgtggtagaagaaatgcatgctacaccaaagaaaatatttcagattttaaat
cagcttatcgaggcgctttcctctgttccagctcctgaattggcactaaggttatacctg
gaatgtgctgaggcagctaatgactgtgaccttgaacctgttgcgtacgaattctttact
caagcatttataatctatgaggaagatatttcggattctaaggctcaagtgactgcaata
caccttattattgggactctgcagaggatgaatgtgtttggcattgagaacagagatact
ttgacacacaaagctactgggtattctgcgaagcttctaaagaaaccagatcagtgtagg
gctgtttatgcatgctcgcatctcttttgggttgatgatccagaaggcattaaggatgga
gagagagttcttctttgcctaaaacgtgccctacgaattgcaaatgctgctcaacagatg
gctactgttacacggggcagcagtggacccgtcacactttttgttgaaatactgaacaag
tacctctactatttcgagaaaggaaaccagcagattacaaccgctgcaattcaagggttg
attgaattaataacaactgaattgcagagtgacctcccgagcgccggtccttcttcagat
gctttctttaccagcacacttcgctacattcagttccagaaacagaaaggtggtgtgatg
ggtgaaagatatgattccatcaaggtttga
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