Cucurbita moschata (crookneck pumpkin): 111443704
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Entry
111443704 CDS
T05248
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111443704
Enzymes [BR:
cmos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111443704
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111443704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
111443704
NCBI-ProteinID:
XP_022937403
UniProt:
A0A6J1FB31
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MANEQEEVAADLEATVLSSAAQQAIFPNDELHVLNDAVPQMPSYVTKDLLSIGVCIPCII
RLSGIERHHYSFSLSVPIVGSDKEAIDDDIDRNICCLCLGILQFSYIDDKGNFVKCKGVD
DLAVSISEMVKKEGHQIDSFSLEVSIPSIILENEKLVWLYLKRKYGSEHWFQGKPPPISL
SAKDALKICVTKPLETLLDCKSSSSGLRIRLTYSHPKASNSNDSSNKRHQDGCKMRKIAG
NDETLDISKFGANSVADNCFNPSQEVELSKCFEFPQEKINEPCHLALICYRTSIYLIGRY
IKYSRNVSQTRWVIGDERMGEASVEEILGNNILPLCRGDSYKFHAAGREDLDVRMLGSGR
PFLVEIQNARLLPSEMIINEIESKINGSKNKLIGVRNLKVVGSEGWAFVQEGEAEKQKQY
AALVWTSRPLEDDDLLSISSLKDLKILQRTPIRVLHRRSPLEREKIIHWMRIEKVAESSQ
YYLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILSCRAEILQLDVTDIKMDGHLAE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgaacaggaagaagtggctgctgatcttgaggcgacagtactttcttccgct
gctcaacaagccatttttccgaatgatgaactgcacgttcttaacgatgccgtcccgcag
atgccttcttacgtgacgaaagacctgttgtcgattggagtatgcataccctgcatcatt
cggctatctggcattgaaaggcaccattattccttctcactgtcggtaccaatcgtaggt
tctgacaaggaggcaattgatgatgatattgatagaaacatttgctgcctatgtttaggt
attttgcagttcagttatattgatgacaaaggtaacttcgtaaaatgtaagggagttgat
gatttagctgtctcgatttccgagatggtaaagaaagaaggccatcagattgatagtttt
tctcttgaggtgtcaattccttcaatcattctggagaatgagaagcttgtttggctgtat
ttgaaaagaaaatatgggtctgaacactggttccagggcaagcctcctcctatatctctt
tcggcgaaagatgcattaaaaatatgtgtaacaaagcctcttgaaactttactggattgc
aaatctagttcaagtggtctgcgcattcggttaacttatagtcatcctaaagcttcaaac
agcaatgatagttccaacaaaagacaccaggacggctgcaagatgagaaaaattgctggc
aatgatgaaaccttggatatttcaaagtttggtgccaattctgtcgctgataattgtttc
aatccttcacaagaagttgaactttctaagtgctttgaatttcctcaagaaaagatcaat
gaaccatgccatttggctctaatttgttataggacttcaatctacttgattggcagatac
attaagtattcaagaaatgtgagtcaaacacgctgggtaatcggtgatgagagaatggga
gaggcatctgtcgaggagattctaggcaacaatattcttcccctctgtcggggtgatagt
tataagttccatgctgctggtagagaggatcttgatgttcggatgttgggttcaggtaga
cctttcctggttgagatacagaatgcccgtcttctcccatctgagatgattataaatgaa
attgagtcgaagataaatggctcaaaaaataaattgattggcgtaagaaatctgaaagtt
gtaggcagcgagggttgggccttcgtgcaagaaggagaagcagagaagcagaagcaatat
gctgcacttgtgtggacgtctcgcccacttgaggatgatgatttgttgtcaatatcatca
ctcaaagacctgaaaattttgcagagaactccaataagagtgcttcatcgccgtagtcca
ttagaacgtgaaaagatcatccactggatgaggattgagaaggtagctgaaagttctcag
tattatctcctgcatttgtgtacccaggctggaacgtacattaaagaatttgtccatggg
gatcttggtcgcacgcatcccagtataggatctattcttagttgcagagcagagattctt
caacttgacgttacggatataaaaatggacggccatctcgctgaataa
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