Cucurbita moschata (crookneck pumpkin): 111443713 Help Entry 111443713         CDS       T05248                                  Name (RefSeq) symplekin-like isoform X1   KO K06100   symplekin Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     111443713  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmos03021]     111443713    03019 Messenger RNA biogenesis [BR:cmos03019]     111443713 Transcription machinery [BR:cmos03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      111443713 Messenger RNA biogenesis [BR:cmos03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      111443713     U7-dependent histone pre-mRNA processing factors      111443713 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Adaptin_N TPR_Trm732_C Motif Other DBs NCBI-GeneID:  111443713 NCBI-ProteinID:  XP_022937414 UniProt:  A0A6J1FB43 LinkDB All DBs Position Unknown AA seq 1310 aa AA seqDB search MAGVFRERALSLLAAANNHGDLTVKISSLKQVKDIILAIEPSFAAELYSYLVELQSSPES LLRKLLIEVIEDIGLRAMEHSPLLMSVLLASLKDEDSIVARQSITSGQKLFCGALREMTL QLHRRGKVERWLEELWMRILKFKDEVLAIAIEPGSVGKRLLALKFLETYVLLFTSDTNDP QKAISEGNGDIFNISWLAGGFPILDTVVLASEANRMLGILLNLLQTSSVAGTYTVTIVSS LAAIARKRPVHYGIILSALLEFVPSFEMVKGRHAASIQYSIRSALLGFLRCLHPAFVELG FQSRDRLLKALRAMNAGDAADQVIRQVDKMVKAADRASRDALLGKDDQSSNQHNASVDLT RKRPRLLDDEELPNGHEVSKQVRLGPDFHPISTVRKDGSRQSAISNGTSHDVPTLDVEST PAEQMIAMIGALLAEGERGAESLEILISNIHPDLLSDIVITNMKNLPKAPPPTTRHGDLP VTHQVSSHVQVLAPSAPLSSVQTSVSTAQAPFSLATSAGSTYAESAVNSLPVDSKRDPRR DPRRLDPRRGGVSSASSVEEAISNTSDVDGSISLGKSASVPVSTTIENSSVFSISKTKVE EKIIETPFPIGTDQPTPKSKSPDRAEKVDSILEIDAPLDPLSTAVGKADDGLVAVNLVDD SATKRDDTSSSIEYNPYSPSVTNAAASEDTCEELPQLPPYVDLTPEQQISVRNLAAEKIF DSCKNLNGADCHQKCLAIIARMVAQVDADDDIVRMLEKQVATDYQQQKGHELVLHVLYHL HSLNILDSVESSSFAVYEKFLLVVAKSLLDAFPASDKSFSRLLGEVPVFPDSTLELLHNL CYCDITDNQGKDSPDIERVTQGLGTVWNLIVKRPHSRQACLDIALKCAMHSEVKVRATAI RLVANKLYRLSYISDRIEQHATNMFLSAVDGVDQTDVKPLPCGSIEQSTGGEGESQETSI CASQVSDPVTSEDNSMRSSQPTVHASSTLSLSEAERHISLLFALCVKKPCLLQTVFDAYG RAPKAVKEQAVHEHIPNLITALGSSNAELLRIISDPPPGSEHLLAMVLQVLTQETTPSSD LIATVRHLYETKLKDVTILIPMLPSLSKNEVLPVFPRLVDLPLEKFQRALAHILQGSAHT RPALTPVEVLIAIHNIIPEKDGLALKKITDACSACFEQRTVFTQQVLAKALSQMVEQTPL PLLFMRTVIQAIDAFPTLVDFFMEILSKLVNRQVWRMPKLWFGFLKCAFETQPHSFRVLL QLPPPQLENALNKYVNLKGPLAAYASQPSTKSTLSRPTLVLLGIENERRL NT seq 3933 nt NT seq  +upstreamnt  +downstreamnt atggcaggagtttttagagaaagagcactgtctctcctcgccgccgctaacaaccacggc gatttaacggtgaagatttcatctttgaagcaggtgaaggatatcatactagccatcgag ccatcttttgcagcagagctctactcctacttggtcgagcttcagtcttcccccgagagc ttactacgtaaattgttaattgaggtgattgaagacattggattgagagccatggaacat tctcctctgttaatgtcagttttattggcatctttgaaggatgaagactctattgtagca cgacaatcaattactagtgggcaaaaattattttgtggtgctttaagagagatgacattg cagttgcatcgacggggtaaagttgagagatggcttgaagaactgtggatgaggatattg aagtttaaagatgaggttttggcaattgccatagagcctggttctgtcgggaagaggttg ctggctttgaaatttttggaaacatatgttctactttttacgtctgatacaaatgatcca caaaaagctatctcagaaggaaatggggatatttttaacatttcatggcttgctggtggg tttccgatattggatacagttgtgctagcgtcggaagctaataggatgcttggtattctt ttgaatttgttgcagaccagttctgttgctggtacatacacagtaacaattgtcagtagt ttagcagctatagcaaggaaaagaccagttcattatggtatcattctatcggcactgttg gaatttgttccaagttttgagatggtaaaagggcgtcatgctgccagtatccagtattct ataagatctgcacttttgggattcctaaggtgtttgcatccagcgtttgtagagcttggt tttcagtcaagagacaggttactaaaggctttaagagctatgaatgctggagatgctgca gatcaggtaatcaggcaagtggacaaaatggtgaaggctgcagatcgagcttcccgtgat gctttgctgggcaaggatgaccaatcatcaaatcagcataatgcatcagtggatctaaca agaaaaagacctaggcttctggacgatgaagaacttcccaatggccatgaggtttccaag caagttcgcttaggtccagattttcacccaatttccacagtgcgaaaagatggttctcga cagagtgccatctctaatgggacatcccatgatgttcctacattagatgttgaatcgact cctgcagagcagatgattgcaatgattggtgccttactagctgaaggggagcgaggtgca gaatcactagaaattctgatttcaaatattcaccccgacttgctgtctgatattgtcata actaacatgaagaacttgcccaaagccccccctccaactactaggcatggggacttacct gtaactcatcaagtaagtagtcacgtacaagttctggcaccatcagctccattgagttct gtgcaaacttcagtttctactgcacaagctcctttttctttggccacctccgctggttca acttatgccgagtctgctgtcaatagtctccctgttgactctaaacgcgatccaagaagg gatccccgccgccttgatcctcgccgtggaggagtatcttctgcttctagtgtggaagag gcaatttcaaatacatctgatgttgatggttccatatctttgggaaaatctgcttcggtt cctgtttctacgacaatcgagaattcttcggtattttctatatctaaaacaaaagttgaa gaaaaaatcattgaaactccattcccgattggaacagatcaaccaacccccaaatcaaaa tctcctgatagagctgagaaagttgactctatattagagattgatgcccctctggatccc ttgtctactgctgttggaaaagctgatgatggtttagttgcagttaatttggtcgatgac tcggcaacaaagagggatgatacatcgtcttctatagaatacaatccgtattctccatca gttacgaatgcagctgcatctgaagatacctgtgaggaattgcctcagcttcctccatac gttgacttgactccagaacagcaaataagtgtaagaaatttggcagctgaaaagatattt gattcgtgcaagaatttaaatggggcagactgccatcagaaatgcttggcaataattgct cgaatggttgctcaggttgatgctgatgatgatattgttcgaatgttggaaaaacaagtc gctactgattaccaacagcaaaaggggcatgagcttgttttacatgtcttatatcacctg cattcactcaatattctagattcagtggaaagttcgtcttttgctgtgtacgagaagttt cttctagttgtggctaaatcactgctagatgcttttccagcttcagacaaatcttttagc agacttcttggtgaagttccagtttttccggactctacgttggaactattacataacctt tgctattgtgatattactgacaaccaggggaaggacagtcccgatattgaacgtgtcacg caaggtcttggcactgtttggaatttgattgtgaaacgtccacatagtcggcaagcttgc ttagatattgctcttaagtgtgcaatgcattcagaagttaaggttcgagcaacagctatt agactggtggcgaacaaactctatcggttaagttacatttcagataggattgaacaacat gcaacaaacatgttcctgtctgcagtagacggcgtagatcagacagatgtaaagccttta ccatgtggatcgatcgagcaaagcactggaggagagggtgagagtcaggaaacatccatt tgtgcttctcaagtttcagatcctgtaacctcagaagacaattccatgaggagttcacaa cctacagttcatgccagttcaaccttgtcactttcagaagctgaaagacatatttctctt ctttttgctctatgcgtaaagaaaccttgtctgcttcaaactgtatttgatgcttatgga cgggctcctaaagccgtgaaagagcaggccgttcatgaacatatccctaatcttattacg gccctaggctcatctaatgctgaattgcttagaataatatcagatccacccccaggaagt gaacatcttttagcaatggttctacaggtactaactcaagagacaacgccttcttccgat ctgatcgcaaccgttagacatttatatgaaactaaactgaaggatgtgactattctcatt ccaatgttgccctcactttccaaaaatgaggttttacctgtttttcctcggctggtcgat cttccattggagaagtttcagagagcgttggctcacatattacagggttcagcacataca cgtccagctttaacgcctgttgaagtattgatcgccatccacaacataattcctgaaaaa gatggccttgcattaaagaagataacggatgcttgttcagcctgttttgagcaacgtaca gtgttcactcagcaggttctagcaaaagccttgagccagatggtcgaacaaacgccactc cctcttctcttcatgagaactgtgattcaggcaattgatgcttttcctactctggttgat tttttcatggagatactttccaaacttgtaaacagacaggtttggaggatgccaaaattg tggtttggtttcttgaaatgtgcatttgaaacacaacctcattcgtttcgagtactattg cagttaccaccgccacagctcgaaaatgctttgaacaaatatgtcaaccttaaaggtcct cttgctgcttatgccagccagcccagcacaaaatctactctctctagaccgacactcgta cttctgggtatcgaaaacgaaaggcgtttgtag

DBGET integrated database retrieval system