KEGG   Cucurbita moschata (crookneck pumpkin): 111443997
Entry
111443997         CDS       T05248                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082  ATP-dependent chromatin remodeling
cmos03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111443997
   03083 Polycomb repressive complex
    111443997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmos03036]
    111443997
Chromosome and associated proteins [BR:cmos03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     111443997
  Histone modification proteins
   HAT complexes
    HATB complex
     111443997
   HDAC complexes
    Sin3A-HDAC complex
     111443997
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     111443997
    PRC2.2
     111443997
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     111443997
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111443997
  Chromatin remodeling factors
   NuRD complex
    111443997
   NuRF complex
    111443997
   NuRF complex (fruit fly)
    111443997
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I WD40_RFWD3 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_1st WD_LRWD1 eIF2A MIOS_WD40 NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Phage_CRI
Other DBs
NCBI-GeneID: 111443997
NCBI-ProteinID: XP_022937662
UniProt: A0A6J1FBV1
LinkDB
Position
Unknown
AA seq 423 aa
MGKDDEEMRGEMEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDSENDARHYDDDRADAGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSKPPLDGTCNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPTVNKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISSALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEPP
KAS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggggaaggatgatgaggagatgcgtggagaaatggaggagaggttgataaacgaggag
tacaagatttggaagaagaatactccgtttctttacgatttggtcatcactcatgcccta
gagtggccttcacttactgtcgagtggttgccggaccgggaggagcctccggggaaggat
tactccgttcagaagatgattttggggactcatacctccgagaatgagccgaattacctc
atgcttgctcaggttcagcttccgcttgaggattctgagaacgatgcgcgacattacgat
gacgaccgtgctgatgcgggtggctttggatgtgcgaacggaaaggtacaaataatccag
caaataaatcacgatggtgaagtcaatagagcacgttatatgcctcaaaatccatttatt
attgccacaaagactgtcagcgcggaagtctttgttttcgactatagtaaacacccatcc
aaaccacctctagatggtacgtgtaatcccgacttgaggttgaggggtcacaataccgaa
ggctatggtttatcctggagcaagttcaagcagggccatttacttagcggctctgatgat
gcacagatttgtttatgggacattaatgctactccgaagaacaaaacccttgaagctatg
caaatttttaaggttcatgaaggtgttgtggaagatgtcgcatggcatctgaggcatgaa
tacttatttggttcagtaggcgacgaccaatacctactaatatgggatctgcgaactcct
actgttaataagcctgtacagtccgtagttgctcatcaaagtgaggtcaattgcttggca
ttcaatccctttaatgagtgggtagtagccacagggtcaactgataagacggttaagttg
ttcgatctacgtaagatcagctctgcactccatacctttgactgtcacaaggaggaggtt
ttccaggttggctggaatccaaagaatgaaacaatcttagcttcttgttgtcttggtagg
agactcatggtttgggaccttagtaggattgatgaggagcagacgcccgaggatgcggaa
gatggcccaccggagttgctgttcattcacggcggtcataccagtaaaatatcagacttc
tcttggaatccctgtgaggactgggtggttgctagtgtagctgaagataacatactccaa
atctggcagatggctgagaacatctaccatgatgaagatgatttgccagaggaacctcca
aaggcctcttag

DBGET integrated database retrieval system