Cucurbita moschata (crookneck pumpkin): 111444040
Help
Entry
111444040 CDS
T05248
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3 isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03440
Homologous recombination
cmos03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111444040
03460 Fanconi anemia pathway
111444040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmos03032
]
111444040
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111444040
Enzymes [BR:
cmos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111444040
DNA replication proteins [BR:
cmos03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
111444040
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
111444040
Bloom's syndrome complex (BTR)
111444040
FA (Fanconi anemia) pathway
111444040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Minor_tail_Z
Motif
Other DBs
NCBI-GeneID:
111444040
NCBI-ProteinID:
XP_022937723
UniProt:
A0A6J1FGR4
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MKKSSLPLRGSIGPGNHEYSNESLVKLLRWHFGHSEFRGKQLETIKAVLSGKDCFCLMPT
GGGKSVCYQIPALATKGIVLVVCPLIALMENQVMALKEKGISAEYLSSTQSIQDKKKIHE
DLDSGKPALRLLYVTPELIATPGFMAKLMKIYSRGLLSLIAIDEAHCISTWGHDFRPGYR
KLSSLRSRLPNVPILALTATAAPKVQKDVIASLGLQNPLVLMSSFNRPNIYYEVRYKDLL
DDPLADLSKQLKASGDVCGIIYCLERALCDQLSVYLGKYGISCAAYHAGLKNELRKSVLE
DWLSSKIQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY
GLEDRRRMEFILRNSSSADKKILPSSSSQKKLSEKSLTDFAQMVEYCEGSGCRRKQILES
FGEQVPAFICSKSCDACKHPNTVAAYLEELTTTCAVGRNNSSSRIFVSSSNMNDEKEFSE
FWNRKDEASGSEEDISDSDDDTEVVKSLAGTKSLKKSGLNEKIALLERAEENYYQNKISV
KQNDKQDKNVVSASFREASRKRLENAIEQAQQRLGSSFKIEVERYACFLEHECYEKYGRT
GKSFYYSQVASTMRWLSTADSKELTSRLRAEENTELPALPSPSPMLDLSKSEKTNEEVHC
SPVLENPASNLSKQNASPAAAAPLPPIPSFAEFVNGRMEKANHSNKSPRLSINRDEKDPV
KRTRLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcatcgcttccattgcgcggtagtatcggccccggaaatcatgagtatagc
aacgaatccttggtgaagctcttaaggtggcatttcggacattctgagtttagaggaaag
caattggaaacgattaaagctgttttatcaggaaaagattgtttctgtctcatgcccact
gggggaggaaagtcagtgtgttatcagatccctgctctcgctacaaagggaatcgtgctt
gttgtttgtcccttaatagcgttgatggaaaaccaagtgatggcgttgaaggaaaaaggg
atttcggctgaatatctatcctcaactcagtcaatacaagacaaaaaaaaaatccatgaa
gatcttgattctggtaaacctgccttaaggcttctctacgttacacctgaattaattgca
acaccaggatttatggcaaaactgatgaaaatttattctcgaggattgctaagtctgatt
gctatagacgaggcacattgtatttcaacgtggggccatgacttcaggcctggctaccgc
aagctttcttctttgaggagtcgtcttcctaatgttcctatacttgccttgacagctact
gctgctcctaaggtccagaaggatgtgatagcatccttgggcttgcaaaaccctctagtt
cttatgtcttcatttaatcgtccgaatatatattacgaagttcgatataaagatcttttg
gatgatccacttgccgatttgtctaagcagctgaaagctagtggagatgtctgtggaatc
atctattgcctagaacgtgcattgtgtgaccaattgtcagtttatctaggaaaatatggt
atttcatgcgctgcttatcatgcaggtttaaagaatgagttgaggaagtctgttttggag
gattggttaagctctaagatacaagttgttgtagccacagtagcttttgggatgggtata
gatagaaaagatgtcagggttgtttgccacttcaatattcccaagtcaatggaagctttt
tatcaagagtcgggtagagctggccgtgatcaattaccctctaaaagtctgttatactat
ggacttgaagaccgcagaagaatggaatttattctaaggaatagctccagtgctgataag
aagattctaccatcttcaagctcccaaaagaagttatcggagaaatccttaactgacttt
gctcagatggttgagtattgtgagggctctggatgtcgcaggaagcaaattcttgagagt
tttggggagcaggttcctgcattcatatgtagtaaatcgtgtgatgcctgcaaacaccca
aatactgtcgctgcctatttggaagagcttactacaacttgtgctgttggacgaaataat
tcatcttctagaatttttgtcagcagctcaaatatgaatgatgagaaagagttttctgaa
ttttggaatcgcaaagatgaagcaagtggatctgaagaagatatatctgattctgatgat
gatactgaggttgtcaaaagcctagctggaacgaagtctctaaagaaatcaggactgaat
gaaaagatagcacttctagagcgtgcggaggaaaattattaccagaacaagatctcagta
aaacagaatgataagcaagacaagaatgttgtatctgcatcatttagggaagctagcagg
aaaagattagagaatgctattgaacaggctcaacaacggcttgggagctcttttaagatt
gaagtggaaagatatgcttgtttccttgagcatgagtgctacgagaaatatggaagaaca
ggaaaatcattctattattcacaagtggccagtaccatgaggtggctgtcgacagcagat
tctaaggagttaaccagtcggcttagggctgaggagaatacagaacttcctgcattgcca
tctccatcccctatgttagatctatcgaagtcagaaaagactaatgaagaagttcattgc
agccctgtattggaaaaccccgcaagcaatttgtcaaagcaaaatgcttcccctgctgct
gctgctcctttgcctccaattccgtcctttgcagaatttgttaatggcagaatggagaag
gcgaatcactcaaataaatcaccaaggctctcgattaacagagatgaaaaggatccagta
aagaggaccaggttactgtag
DBGET
integrated database retrieval system
