Cucurbita moschata (crookneck pumpkin): 111444063
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Entry
111444063 CDS
T05248
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmos03000
]
111444063
03036 Chromosome and associated proteins [BR:
cmos03036
]
111444063
Transcription factors [BR:
cmos03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
111444063
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111444063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
N36
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
111444063
NCBI-ProteinID:
XP_022937757
UniProt:
A0A6J1FC49
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MTEKHEDVEDVGSVSTDSFIDDSEDDGPSTSGQDEQLHLEEPLTEQEIEDLMAEFLEVES
KAAEAQEALEKESLSKVENEVREELALTLNGDDLETAVANEMNILVEEWEGVLDELEIES
AQLLEQLDGAGVELPSLFKQIESQASYGCYTEAWKKRIHWVGSQVTGDLLVSVSDAEKTL
QTQRPVRRRHGKLLEEGASGYLQKKFSTLEMEGNGSENLEVDWCSLNKVFSEGSNNNETL
FGSKNWASIYLASTPQQAAEMGLKFPGVDEVEEIDDVDGNSSDPFVAAAIANEKELDLSE
EQKRNFRKVKEEDDAIFDRKLQMHLKQKRYQKRCKQEVFQKDVSTVDKVIQRDEEQLVSP
VDCLNPVLDEKTEGNRKGLSDDENADGASSDIDMEGSLEKTASLHPSALSDFVEPLGSKR
LNDTEELIIQTKKSRTNGVHEDESPLIKEDSAFNPTTLDTLCNTKQNDHGADSLPSECLN
EKIRCTACDQMVIKAHAHPFLNVIVCEDCKCLMDDKKNVKEPDCSECYCGWCGRNADLVS
CKSCKTLFCISCIRRNLGVECLLKAQSSGWHCCCCRPSLLQSLTMQLEEVLGSEDLTGSS
SDSDSDNPHADINGTISSKRRRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLKVQF
SSDSKRMSSAGFCGNLPEGASAEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQV
SGIRFMWENIIQSVRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRNVDLGLRTAVI
VTPVNVLHNWRQEFFRWKPSELKPLRVFMLEDVPRERRAELLAKWRAKGGVFLIGYSAFR
NLSLGKHVKDRHMAKEICHALQDGPDILVCDEAHMIKNTKADVTQALKQVKCQRRIALTG
SPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLEDVKIMNQRSHILY
EQLKGFVQRMDMSVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDSSELLRK
RSFFAGYQALAQIWNHPGILQLTKEDKYSVKREDAVENFLADESSSDENIDSNIGIGEKP
ANANGNHQDKYAGGFFVKDWWSGLLHASSYKELDYSGKMVLLVEILTMCSELGDKALVFS
QSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQRIVERFNESLNKRVK
CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTM
EEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDENPEGATELDLGNGHEPH
QTMTGNHGNVLKQKGPLSHGSCSSDKLMETLLGKHHPRWVANYHEHEKLLQENEEEKLSK
EEQDMAWEVYRKSLEWEEVQKVSPGDTTAEQKLTTSIVTGPAPKTIDLAQSRARNRFITR
KCTNLSHLLTLRSQGTKVGCSTICGECAQEISWEELNKDSKK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaagcacgaagacgttgaagatgtaggcagtgtgtctaccgattcttttatc
gatgactctgaagatgatgggccatctacatctgggcaggacgagcaattgcatctcgag
gaacctttgacagagcaagagatagaggatttgatggctgagttcttggaagttgagagt
aaggccgcagaggctcaagaagcacttgaaaaggagtctctttccaaagtggagaacgaa
gttcgagaagaattggcattgactcttaatggtgatgatcttgaaactgcggttgcaaat
gaaatgaatattttggtagaagagtgggaaggtgtgcttgatgaacttgagattgagagt
gctcagttattggagcaacttgatggtgctggtgtcgagttaccgagtcttttcaaacaa
attgaaagtcaggcttcttatggttgctatactgaagcttggaaaaagaggatacactgg
gtagggtctcaagtaactggcgatcttcttgtatctgtatctgacgcagagaagaccctt
caaacccaaaggcctgtaaggagacgacatggtaaacttttggaggagggcgcaagtgga
tatctgcagaagaaattctccactctcgagatggagggaaatggatcagaaaatttggaa
gttgattggtgctctcttaataaagttttttcagaaggctcaaataacaatgaaacatta
ttcggcagcaagaattgggcttctatttacttggccagcactccgcagcaggctgcagaa
atgggactaaaatttcctggagttgatgaggtagaggaaattgatgatgttgatggaaat
tctagtgatccgtttgttgctgctgccattgcaaatgaaaaagagttggatctttctgaa
gaacaaaagagaaatttcagaaaggtcaaagaagaagatgatgccatttttgatagaaaa
ctccaaatgcatttgaaacaaaagcgatatcagaagagatgtaaacaggaggtctttcaa
aaagatgtttccactgttgataaagtgatacaaagagatgaagagcagcttgtatctccg
gttgactgtttgaaccctgttttagatgagaaaactgaaggaaatcgaaagggcctctcg
gatgatgaaaatgcagatggtgcttcaagtgatattgacatggaagggtctttggagaaa
actgcttctttgcatccttcagcgttatctgattttgtggaacctttaggttcaaagcgt
ttaaacgatactgaagaactgattattcaaactaaaaagagtcgtaccaatggtgtacat
gaggatgaaagtcccctgataaaggaggattctgctttcaatccaacaacgttggacacc
ctatgcaacaccaaacaaaatgaccatggtgctgattctcttccatcagagtgcctgaat
gagaagattcgttgtactgcgtgtgatcaaatggttattaaagcgcatgcacaccctttt
ctgaacgtaattgtttgtgaggattgcaaatgtttgatggatgacaagaagaatgtaaag
gaacctgattgctcggagtgctattgtggatggtgtgggcgaaatgctgacttagtaagt
tgtaaatcatgcaagacactattttgtatcagttgcataaggaggaacctcggtgtcgag
tgcttgctcaaggcccaatcttctggctggcattgttgttgttgtcgcccaagtctcttg
caatccttgaccatgcagttggaggaggtcttaggatctgaagacttgaccggttctagc
tctgacagcgattcagacaacccacatgcagatattaatggaaccataagctcaaagaga
aggcgtaagaaaaagatccggcggatacttgatgatgctgaattaggagaagatactaaa
aagaaaattgccatagaaaaggaacgccaagaacgtctaaaatcactaaaagttcagttt
tcctctgattctaaaagaatgagctctgctggcttttgtggtaatctacctgaaggtgct
agtgctgaagtccttggtgatgcttcaacgggatatatagtcaatgtagtaagggagaag
ggggaggaagcgattagaattccacccagcatttcatcgaagttgaaaacccatcaggtt
tctggaataagatttatgtgggaaaatatcattcaatcagtaaggaaagtgaagtctggt
gataaaggtcttggatgcattcttgctcacacaatgggccttggtaaaacttttcaggtt
atagcattcttgtacactgcaatgaggaatgtggacttgggtttacgaactgcagttata
gtcacccctgttaatgtgttgcataattggcggcaagaattctttaggtggaaaccttca
gaattaaagcctcttcgtgttttcatgcttgaagatgtgccaagggagaggagggcagag
ttgcttgctaagtggagagctaagggtggtgtctttttaattggttatagtgctttccgc
aatttatctcttggtaaacatgtcaaagaccggcacatggccaaagaaatttgccatgcc
ttgcaggatggacctgatattcttgtatgtgacgaggcccacatgattaagaataccaag
gctgatgtaacccaggcattgaaacaagtgaaatgccagaggaggattgcattaactgga
tcaccactacagaacaatctcatggagtattattgtatggttgattttgtgagagaaggt
ttcctgggaagtagccatgaatttaggaatcgcttccagaaccctatagagaatgggcag
cataccaattcaactctggaagatgttaaaataatgaaccagaggtctcatatcctatat
gaacagttgaaagggtttgtacaaaggatggacatgtctgtggtgaagaaggacttgccg
cctaaaactgtctttgtgatatccgttaaactttctcccttacagaggaagttgtacaaa
agatttcttgacgtgcatggttttaataatggcaaagattctagtgaactgttgaggaag
aggagcttttttgctggataccaagcacttgctcagatttggaatcatcctggaatcctc
caattgacaaaagaagacaaatattccgtgaagcgtgaagatgctgttgaaaattttctt
gcagatgaaagctccagtgacgaaaacatagattctaatatcggcattggagagaagcca
gccaatgccaatgggaatcatcaggataaatatgctggtggctttttcgttaaggattgg
tggagtggtctgcttcacgcaagtagttacaaggagctggattacagtggaaaaatggtt
ttgctagtagagatcttaactatgtgctctgaattgggggataaggcgttagtattcagc
cagagcattcctacgcttgacctaattgaattctatctttcaagattgcccagacgaggg
aagagaggaaaattctggaagaagggtaaagattggtataggctagatggaagaacagag
agttctgaaagacagaggattgttgagaggtttaatgagtctctaaataagagggtaaaa
tgtaccctgatatcaactagagctggatcattgggtatcaaccttcattctgctaaccgc
gtcatcatagtcgatggctcttggaatccaacttatgatcttcaggctatttatcgagct
tggagatatggccaaacgaaacctgtgtttgcttaccggtttttggcgcatggaacaatg
gaagaaaaaatttacaagcgccaggtaacaaaggagggactggctgcaagagttgttgat
cgccaacaggtataccgaacgatttctcgggaagaaatgttgcatctttttgaatttggt
gatgatgagaatcctgagggtgccactgagttggacctaggaaatggacatgaacctcac
cagactatgactgggaatcacggcaatgtgctgaagcagaaagggcctctttcacatgga
agttgctcatctgataagttaatggaaactttacttggcaaacaccatccaagatgggtt
gccaattaccatgagcacgaaaaactactccaagaaaatgaagaggaaaaactatctaag
gaggagcaagacatggcatgggaagtgtacagaaaatcattagaatgggaggaagtccaa
aaagtttcaccaggcgacactacagccgagcaaaagctaaccacatcgatcgtcactggt
ccagcacccaagaccatcgatctggcacaatcaagggcaaggaaccgattcattactcgt
aaatgcacgaatctttctcacttgctgacactcagaagccagggaacaaaggttggttgt
agtacaatatgtggggaatgtgcacaagagataagctgggaagagctcaacaaagatagc
aagaagtga
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integrated database retrieval system
