Cucurbita moschata (crookneck pumpkin): 111444131
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Entry
111444131 CDS
T05248
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111444131
Membrane trafficking [BR:
cmos04131
]
Protein recycling
Others
EARP complex
111444131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
111444131
NCBI-ProteinID:
XP_022937871
UniProt:
A0A6J1FBK6
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MQPNLFPFGSVLGNPFTYNGDLSEGFETSRFLFFVPFFLLQGGGMDLSKVGEKILSSVRS
ARSLGLLPTPTDRPEVQVPARAVAAAAVARALAGLPPHQRFSLPSSSEELSSIYGSRSHG
HEVEELEEVFYEEDFDPVRHVLEHVPSEENDLEYLEKQATTRLAQLDKVAERLSRHVMEH
HEVMVKGMHLVRELEKDLKIANVICRNGKRHLTSSMLEVSRDLIVNSNSKKKQALLDMVP
VLSELRHAVDMQSMLESLVEEGNYYKAFQVLSEYLQLLDSFSELSVIQEMSRGVEVWLGR
TLQKLDLLLIEVCQEFKKEGYLTVIDAYALIGDVSGLSEKIQSFFMQEVISETHSSLKDI
VQEDQDVRVQNSRLTYSDLCLRIPESKFRQCLLKTLAVLFTLMCSYYQILSFQLDTKDSV
QQSPNMNQLEDNCDLNLGDTEESTTRIMNPVYVDGSDSNMESRTDSSTASTSGSPWYHLR
KDAISFVSQILQKGRKNLWQLSTSRVSVLLSSVAVCSTSIHQFLKNYEDLNVFILAGEAF
CGVEAVEFRQKFKIVCENYYGTFHKQSMHALKMVMEKENWLILPPETVQVVSFAGLIGDG
APLFVPSDGKSSNTKVRQSDKSASSVSTGGGRSGFLQWIKSGNPFLLKLMHTCKEDIPNG
AFYGELDGSAGGSSHRNSHSENTDNLENGGHVVSEGEDENEDLLADFIDEDSQLPSRISR
PKLPRNSSNHNFDEVSAQTGSSLCLLRFMDKYARLMQKLEIVNIEFFKGMCQLFELFFYF
VYETFGQPNTTSGGKGFPDSLNYKLKAALSRASQDCDQWIKSNSSSPSASNSTFSFNEVT
PSPPGSSFGYLHGTTFGLKERSAGADSLSLVARIMHRSKAHIQSMLLQTNATVIEDFYAH
LLDAVPYLIEHIHKNTARLLLHVNGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKT
RLAHSGVRNEVQNLLLEYGLDLVAETLIEGISRVKRCSDEGRALMSLDLQVLINGLQHFV
SANVKPKLQMVETFIKAYYLPETEYVHWARAHPEYSKSQIIGLVNLVALMKGWKRKTRLE
VLEKIE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaaatttgtttccatttggcagtgttcttggaaaccctttcacgtacaatggt
gatttgagcgaaggattcgagacgtccaggtttctcttctttgttccgttttttctgctg
caaggaggtggaatggacttgtctaaggttggggagaagattttgagctcggtgaggtct
gctagatcgcttggacttcttcctacccctactgatcgtccggaggtgcaggttcccgca
cgtgctgtggctgcggcagctgttgcccgtgcacttgctggattgcctcctcatcagaga
tttagtctcccatctagctctgaagaactgagctcaatatatggcagtagaagtcatggt
cacgaagtagaggaactagaggaagtattctatgaagaggattttgacccagttaggcat
gtgttagagcatgttccatcagaagaaaatgatctggaatatttggagaaacaggctaca
acgagattagctcaacttgataaagtggctgaacggttatctcgtcatgtaatggagcat
catgaagtgatggtgaaggggatgcatttggtcagggagctggaaaaagacttgaagatt
gcgaatgtcatctgcaggaatgggaagagacacctaacttcgtcaatgcttgaagtctct
agagatctcattgtaaactctaattcgaagaagaaacaagcacttctggacatggttcca
gttttgagtgagcttcgtcatgctgtggacatgcaatcaatgcttgagtctcttgttgaa
gagggaaattattacaaggcttttcaggttttatccgagtatttgcagctattggatagt
ttttcagagctttcagtcattcaagagatgagccgtggtgtagaggtttggcttggaaga
accctacaaaagttggatttacttttgatagaagtctgtcaggagttcaagaaggagggc
tatttaactgtgattgatgcttatgcactaataggggatgtctctggcctttcggaaaag
atacaaagcttttttatgcaggaagttatatcagaaacccattcttccttgaaagacatt
gtgcaagaggatcaggatgtacgcgtacaaaatagtaggcttacatacagtgatctatgc
cttcgaatacctgaatcaaagtttaggcagtgtttgttaaaaacactagctgtcttattt
accttgatgtgttcatattatcaaatcttaagcttccaactggatacaaaggattcagtt
caacaatctcctaacatgaatcaactagaagataattgtgaccttaatttaggagataca
gaggaatcaacgacaagaattatgaatcctgtttacgtggatgggagtgattctaatatg
gagtcccggacagatagcagtacagcatcaaccagtggttctccctggtatcatctgaga
aaagatgctataagttttgtttcccaaatccttcaaaaaggccgtaagaacctctggcaa
ctatcaactagtcgtgtgtcagtactgctttcttctgttgctgtttgttcaacgagcatt
catcaattcttgaaaaactacgaagatctcaatgtcttcatattggctggagaagccttc
tgtggagttgaagcagttgagtttaggcaaaagttcaagattgtttgtgaaaactattat
gggacttttcataagcagagtatgcacgctctaaagatggttatggaaaaagagaattgg
cttattctgccacccgaaacagttcaagttgttagttttgctggactgattggtgacgga
gcacctctgtttgttccatctgatggtaagtcgtctaacaccaaggtccgacagtcagat
aagtcagcaagctcagtcagtacaggtgggggtagaagtggttttttgcagtggatcaaa
agtggaaatccatttttacttaaactaatgcatacttgtaaagaagacatacccaatgga
gccttttatggagaattggatggaagtgctggtggaagttctcataggaactctcactct
gagaatacagacaatcttgaaaatggtggtcatgttgtgtctgaaggtgaagatgaaaat
gaagatcttttagctgactttattgatgaagatagtcaacttccaagcagaatttcaaga
cccaaacttccacgaaattcttctaaccataattttgatgaagtttcagcacaaacagga
tcatctctatgccttttaaggttcatggacaaatatgcaaggcttatgcagaaactagag
atagtgaatattgagtttttcaagggtatgtgccagttgtttgaattgttcttctatttt
gtgtacgagacttttggccagcctaacactacttctggtggaaagggcttccctgactcc
ctcaattataaattgaaggcagctttatcccgggcttcacaggattgtgatcagtggata
aaatctaattcatcttccccatcagcatcgaattcaacattttctttcaacgaagttacc
ccaagccctcctggcagtagcttcggttacttgcatggaacaacttttggtctcaaggag
aggagtgcaggtgctgactcattatcacttgtggcaagaataatgcataggtctaaagct
catattcaatccatgcttctgcaaacaaatgcaactgtaattgaagacttttatgcacat
ctgttggatgccgtcccatatctcattgagcatattcataagaacactgcaagattgctt
cttcatgtcaatggttatgttgatcggatagccaatgcaaaatgggaagttaaagagctt
ggactcgagcataatgggtacgttgacttgttactgggagaattcaagcattataaaaca
aggctggcccatagtggagttcgcaatgaggttcaaaacctcctcttggagtatggactg
gatctcgtcgctgaaactcttatcgaaggtatatcacgagtaaagagatgttcagatgaa
gggcgtgctctcatgtcattggatcttcaggttttaatcaatggcttgcaacatttcgtt
tctgcaaacgtcaagcctaagttacaaatggttgaaacgttcattaaggcatactatctc
ccagaaaccgaatacgtacactgggcacgtgctcacccggaatacagtaagagccaaatt
attggtttggttaacctggtggcattgatgaaagggtggaagagaaaaacccgattggaa
gtattggagaagattgagtga
DBGET
integrated database retrieval system
