Cucurbita moschata (crookneck pumpkin): 111444209
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Entry
111444209 CDS
T05248
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111444209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111444209
03036 Chromosome and associated proteins [BR:
cmos03036
]
111444209
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111444209
Coactivators
SAGA/TFTC/STAGA complex
111444209
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111444209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF7952
Motif
Other DBs
NCBI-GeneID:
111444209
NCBI-ProteinID:
XP_022937987
UniProt:
A0A6J1FCR1
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MDPYIMKLLEDDEDETMHSGAAVAAFQAASNREIEGDVPTVSQTNASDTAFSGGNNGSSG
LLLQASSQNKNTESHVQLDKNFRLKQEQRSSLMEPERCTSVPENQQQHNAAPLRASKNQP
HADREQVEAEQVSAHFSQTEELQVAEQVPILMNYSNRMQYPDNESQYLKLQKMSNQEAMV
SEQANNSLNRSKQVPFASLMPVLMPQLDKDRGMQLQSLFNKLKRNEMNKDDFVRCIRSVV
GNQMLRLAVSQVQSQPPPSVRQPSPRMPSMGPGAPNFSDSRPFAQLHQKGMNSPAVQSYI
PSSASQGQSSSWYPAKDKNTKSLREVEQRSDGVNQWTSSSSGTIQERKRSSVPVSGLEKQ
KLHLQQKSFSMYGNSGNYHPYTGSSINASSLSSKPQTHEGHVKQIPQQAPSLGRQVTIND
FKRVQGGNVPHLHNNLTAQQVSWKSSISKEQNTGPLSSMSYIKQQSSGQVSEQNKPQLSN
LQGLSSVSSMQVEHVKTTPGIGKDALAKQTSKMGFPINNVMPPTSSNAANFISSDASSLH
DSNAVLCSQVPSAATPGMQNRAPQIKVVVGQKKPLETLGSSPPLPSKKQKLSGAFSDQSI
EQLNDVTVVSGVNIEEEEEQLFSSAKENSRAFEASRKVVQEEERLLFQKGQLQKKLVEII
AKCGLKGMSNEVERCLSLCVEERLRGIISNLIRLSKQRVDAEKPRHRTLVTSDVRQQITL
ANQKAREEWEKKRGEGEELRRLNDPEDGQRVAGEKEKDEGRMKSVKANKEEDDKMRTTAA
NVAARAAFGGDDMLSKWQLMAEQARQKREGRMNSASGSQSGNDAVRKFSSAAGRRRKDNQ
EGTSRSFGSTQINETQTRVARSISVKDLIAVLQREPQMCRSTTIYRSYNRVRAEATDE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggacccctatattatgaagcttctggaagatgacgaggatgaaacaatgcattcaggt
gcagctgtggcggcttttcaggctgcctcgaatagagagatagaaggtgatgttccgacc
gtttcccagactaatgcatcagatacagccttctctggagggaacaatggttcttctggc
ctcttgctacaagcttctagtcaaaataaaaataccgaatctcatgtccaactagataaa
aattttcgtttgaagcaagaacaacgttcatctctgatggaaccagagcgatgtacatca
gtacctgaaaatcagcagcaacacaatgctgcccccctccgagcttcaaagaaccaaccc
catgcagatcgtgaacaagtggaggcagaacaagtttctgctcacttttctcaaacagaa
gaactgcaagttgctgaacaagttccaatcctcatgaattactcaaacagaatgcagtac
ccggacaatgaatctcaatacttgaagttacaaaagatgagtaatcaggaggcaatggtc
tcggaacaggcaaataactcattaaatcgtagcaaacaggtaccttttgcctcgttgatg
cctgtattgatgcctcagcttgataaagacagaggcatgcaacttcagagtttattcaac
aaattgaaaaggaatgaaatgaacaaagatgattttgtccggtgcatcaggagtgttgtg
ggcaatcagatgcttagattagcagttagtcaagtacaatctcagcctccaccttcagta
aggcaaccttctcctagaatgccatctatgggtcccggtgcaccaaatttctctgattca
cgaccatttgcacaacttcatcagaaaggcatgaattctcctgcagttcaatcgtacata
ccttcttcagcatcccaagggcagagtagttcatggtaccctgccaaagacaagaacaca
aaatctttacgagaagtcgaacagcgatctgatggtgtaaatcaatggacttcatctagt
tcaggcaccattcaggaaaggaaacgctcctcagttcctgtttcaggactcgagaagcag
aagctacacttacaacagaaatcgttttccatgtatggaaacagtggtaattaccacccg
tatactgggtctagcataaatgcctcttcattgtcttctaaaccccaaactcatgagggt
cacgtgaagcaaattccccagcaggctcctagtcttggcaggcaagttaccataaatgat
ttcaagcgagtgcagggtggaaatgttccacacttgcacaacaacttaactgcacagcaa
gtttcttggaaatcctcaataagtaaagagcagaatacaggccctttgtcatcgatgagt
tacattaaacaacagtcttctggtcaggtttctgagcagaacaaaccccaactttcaaat
ttgcagggattgtcttctgtttctagcatgcaggttgaacacgttaaaacaacccctgga
attgggaaggacgctcttgcaaaacaaacttctaaaatgggttttcctataaacaatgtt
atgcctccaacatcttccaacgcggcaaatttcatttcttctgatgccagttctctacat
gactctaatgctgtgttatgctctcaggtgccttctgcagctactcctggaatgcaaaac
agggcacctcaaataaaagtagtcgttggccagaagaagccccttgaaacacttggctct
tcaccacccctaccaagtaagaagcaaaaactatctggggcattttcggatcaaagcatc
gaacaacttaacgatgtcactgtagtcagtggagttaatattgaggaagaagaagaacaa
ctattttctagtgcaaaggaaaatagtcgagcttttgaagcatcacgaaaggttgtacaa
gaagaagagagactactatttcagaaaggccaattgcagaaaaagctggtggaaatcatt
gctaaatgcggtttgaagggcatgagcaatgaggttgagagatgtctctcattgtgtgtg
gaggaaagattacgtgggattattagtaatctaatcaggctgtctaagcagcgagtggac
gccgagaaaccaaggcaccgaacacttgttacttcagatgttcgacaacaaatcacgtta
gctaaccaaaaggccagagaagaatgggagaagaaacggggtgaaggagaagaactccga
aggcttaatgatcctgaagatggtcagagggttgctggtgagaaggagaaagatgaaggt
cgaatgaaatcagttaaggcaaacaaagaggaggacgataaaatgcggacaacagcagca
aatgttgctgcccgtgctgcttttggaggagatgacatgctatcaaaatggcaacttatg
gctgagcaggcacgacagaaacgtgaaggtagaatgaattcagcttctggttctcagtca
gggaatgatgctgtccgtaagttttcatcagcagcaggaagacgtaggaaggacaaccaa
gaaggaactagcagaagctttggtagcacccaaatcaatgaaactcaaactagggtggct
cgtagtatttctgtcaaagatctcattgctgttctacaaagagaaccccagatgtgtaga
tccaccacaatatatcgttcgtacaacagagttcgtgctgaagcaaccgacgaatag
DBGET
integrated database retrieval system
